Vicugna pacos (alpaca): 102534288
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Entry
102534288 CDS
T08098
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
102534288 (HNF1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102534288 (HNF1B)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102534288 (HNF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
102534288
NCBI-ProteinID:
XP_006213390
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All DBs
Position
16
AA seq
558 aa
AA seq
DB search
MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPSFGVKLETLPLSPGSGAEPDTKP
VFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWR
AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL
RQFNQTVQSSGNLTDKSSQDQLLFLFPEFSQQSQGPGQSDDVCSEPTNKKMRRNRFKWGP
ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF
ANRRKEEAFRQKLAMDAYSSNQTHSLNTLLAHGSPHHQPSASPPNKLSGVRYSQQGNNEV
TSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMQISVSGGGLPPVSTLTNI
HSLPHHNPQQSQNLIMTPLSGVMAIAQSLNSSQAQSVPVINSVAGSLAALQPVQFSQQLH
SPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSS
ISTLTNMSSSKQCPLQAW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaagctcacgtcgctccagcaagaactcctgagcgccctgctgagctccggg
gtcaccaaggaggtgctggtccaggccttggaggagctactaccatccccgagtttcggg
gtgaagttggagacgctgcccctgtcccctgggagcggggcagagccggacaccaagcca
gtcttccacactctcacgaacggccacgccaagggccgcttatccggggacgagggctcc
gaggacggggacgactatgacacccctcccatcctcaaggagctgcaagcgctcaatacc
gaggaggcggcggagcagcgggcggaggtggaccggatgctcagcgaggacccttggagg
gctgccaaaatgatcaagggctacatgcagcaacataacatcccccagagggaggtggtc
gatgtcaccggtctgaaccagtcacacctctcccagcatctcaacaagggcaccccgatg
aaaacccagaagcgggctgccctgtacacctggtacgtccgaaagcaacgggagatcctc
cgacaattcaaccagacagtccagagttctggaaatttgacagacaaaagcagtcaggat
cagctgctgtttctctttccagagttcagtcaacagagccaggggcctgggcagtccgat
gacgtctgctctgagcccaccaacaagaagatgcgtcgcaaccggttcaaatgggggccc
gcatcccagcaaatcttgtaccaggcctacgaccggcaaaagaaccccagcaaggaagag
agggaggccttagtggaggagtgcaacagggcagaatgtttgcagcgaggcgtctccccc
tccaaagcccacggcctgggctccaacctggtcaccgaggtccgcgtctacaactggttt
gcaaaccgcaggaaggaggaggcgttccggcagaagctggccatggacgcctacagctcc
aaccagacgcacagcctcaacaccctgctcgcccatggctccccccaccaccagcccagc
gcctcgcctccaaacaagctgtcaggagtgcgctacagccagcagggaaacaatgaggtc
acttcctcctcgaccatcagtcaccatggcaacagcgccatggtgactagccagtcggtt
ttacagcaagtctctccagccagcctggacccaggccacaatctcctctcacctgatggt
aaaatgcagatctcagtctcaggaggaggtttgccccccgtcagcaccttgacgaatatt
cacagtctgccccaccacaatccccagcaatctcagaacctcatcatgacccccctctct
ggagtcatggccattgcacaaagcctcaactcctcccaagctcagagcgtccccgttatc
aacagcgtggccggcagcctggcagccctgcagcccgttcagttctcccagcagctgcac
agccctcaccagcagcccctcatgcagcagagcccgggcagccacatggcccagcagccc
ttcatggccgctgtgactcagctgcagaactcacacatgtacgcacacaagcaggaaccc
ccccagtattcccacacctcccggtttccatctgcaatggtggtcacagataccagcagc
atcagtacactcaccaacatgtcttccagtaaacagtgtcctctccaagcctggtga
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