Vicugna pacos (alpaca): 102534391
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Entry
102534391 CDS
T08098
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03250
Viral life cycle - HIV-1
vpc03272
Virion - Hepatitis viruses
vpc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102534391 (PDCD6IP)
03272 Virion - Hepatitis viruses
102534391 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102534391 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102534391 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpc04147
]
102534391 (PDCD6IP)
Membrane trafficking [BR:
vpc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
102534391 (PDCD6IP)
Exosome [BR:
vpc04147
]
Exosomal proteins
Proteins found in most exosomes
102534391 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
Ly49
AAT
Motif
Other DBs
NCBI-GeneID:
102534391
NCBI-ProteinID:
XP_006200691
UniProt:
A0A6I9I2C2
LinkDB
All DBs
Position
17
AA seq
882 aa
AA seq
DB search
MATFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKY
FYFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYV
NVKDFSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLF
EKMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDISGDTVPQ
SILTKSTSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKER
WQRTPSNDLYKPLRAEGSNFRTVLDKAVQADGQVKERYQAHRDTIALLCKPEPELNAAIP
SANPAKTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVIN
EEAISVTELDRIYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKN
LATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAR
EPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRTPATAPAA
APAPAAAPAPVGTGTTAPAPSQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAY
GQYNMPYPPVYHQTPGQAPYPGPQQPSYPFPQPPQQSYYPQQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcatctcagtacagctgaaaaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacctatccgagcggcggggaggagcaggcccagtactgc
cgcgcggccgaggagctcagcaagctgcgccgcgcggcgcttggccgcccgctggacaag
catgagggcgcgctcgagacgctcctgagatattatgaccagatctgttccattgaaccc
aaatttccattttctgaaaaccagatctgtttgacatttacttggaaggatgcttttgat
aaaggttcactttttggaggatccgtaaaattggctcttgcaagcttaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagattgcagcagaacagaacctg
gataatgatgaaggattgaaaatcgctgctaagcattaccagtttgctagtggtgccttt
ttacacattaaggagacggttttatctgccttaaatcgagagcctactgtggacatatct
ccagatactgttgggaccctcagtcttatcatgttggcacaggcccaagaagtatttttt
ttaaaagccacgagagataagatgaaagatgccatcatagctaaattggctaatcaggct
gcagattattttggtgatgcttttaaacagtgtcagtacaaagatactctccccaagtat
ttttatttccaggaggtgttccctgtcttggctgcaaagcactgtattatgcaagccaac
gctgagtaccaccagtccatcctggcgaaacagcagaagaaatttggagaagagattgca
aggttacagcatgcagcagaattgattaaaaccgtggcatctcgctatgatgaatatgtc
aatgtgaaggatttttctgacaaaatcaaccgtgcccttactgcagcaaagaaggataat
gacttcatttatcatgatcgagttccagaccttaaagatctagaccctattggcaaagcc
actcttgtgaaatctaccccagtcaatgtacccatcagccagaaattcacagatctgttt
gagaagatggttcctgtgtcagtgcagcagtctttggcagcttataatcagaggaaagct
gatttagttaacagatcaattgctcaaatgagagaagccaccactttggcaaatggggtg
ttagcttcccttaatcttccagcagcaattgaagatatatctggagataccgtacctcag
tctatattgactaagtccacatctgtgattgagcagggaggcatccagactgttgatcag
ttgatcaaagaactacccgaacttctacaaagaaatagagaaatcctagatgagtcatta
agattgttggatgaagaagaagcaactgacaatgatttaagagcaaaattcaaggaacgc
tggcagagaacaccatccaatgacctctataagcctttaagagcagagggaagcaacttc
agaaccgttttggacaaagcagtgcaggcagatgggcaggtgaaagaacgttaccaggct
caccgggacaccatcgcacttctgtgtaagcccgagcccgagctgaacgctgccatccct
tctgctaacccagcaaagaccatgcagggcagtgaggttgtaaatgtcttaaaatcctta
ttgacaaatcttgacgaagtaaagaaggaaagagaggggctggagaatgacctgaaatca
gtgaattttgacatgacaagcaaatttttgactgctctggctcaagatggtgtgataaat
gaagaagctatttctgtaactgaactggatcgaatctatggaggtcttaccactaaagtc
caagagtctctaaagaaacaggaagggctccttaaaaatattcaggtctcacaccaggaa
ttttcgaaaatgaaacaatctaataatgaagctaacttaagagaagaagttttgaagaat
ttagctactgcatatgacaactttgttgaacttgtagctaatttgaaggagggcacaaag
ttttacaatgagctgactgaaatactcgtcaggttccaaaacaaatgcagcgatatagtg
tttgcacggaagacagaaagagatgaactcttaaaggacttgcaacaaagcattgccaga
gaacctagtgctccttcaattcctacacctgcatatcagtcctctccagcagggggacat
gctcccactcctccaactccagcgccaagaaccatgccgcctactaagccccagccccca
gcccggcctccacctcctgtgcttccagcaaatcgaactcctgctactgctccagctgca
gctccagctccagctgcagctccagctccagtgggcaccggcaccactgcaccagctcca
tcgcagactcctggttcagctccccctccacaggcccagggacccccataccccacctat
ccagggtatcccgggtattgccaaatgcccatgcccatgggctataatccttacgcatac
ggccagtataatatgccatatccacccgtgtatcaccagacccccggacaggctccgtac
ccgggaccccagcagccttcataccccttccctcagcccccacagcagtcttactatcca
cagcagtaa
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integrated database retrieval system
