Vicugna pacos (alpaca): 102534514
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Entry
102534514 CDS
T08098
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102534514 (COL8A1)
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Paralog
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
102534514
NCBI-ProteinID:
XP_006208115
UniProt:
A0A6I9IB56
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Position
Unknown
AA seq
745 aa
AA seq
DB search
MAVPPAPLQLLGVLLIVSLGSVRLTQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQVPH
MPLGKDGLNVGKELPHMQYGKEYPHLPQYMKEIQPAPRMGKEAAPKKGKVEIPLASLRGE
QGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGIGKPGMPGMPGKPGAMGMPGAKG
EIGPKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGERGPKGPPGPPGLQGP
KGEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQG
PIGVPGVQGPPGMPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPK
GDRGVGGVPGALGPRGEKGPVGAPGMGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIV
GPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGLPGAPGLL
GPKGEPGIPGDQGLQGPPGIPGIAGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGVAG
LHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPHGEYLPDMGLGIDGVKPPH
AYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPG
VYYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMP
SEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccgccggcgcctctgcagctgctgggggtgctgctcatcgtttccctgggc
tccgtcaggctcacccaagctggtgcctactatggaatcaagccgctgccacctcaaatc
cctcctcagatcccaccgcaaattccacagtaccagcccctgggccagcaagtacctcat
atgcccctgggcaaagatggccttaacgtgggcaaggagctgccccacatgcagtacggc
aaggagtatccacatctaccccaatatatgaaggaaattcagccggcgccaagaatgggc
aaggaagcagcacctaagaaaggcaaagtagaaataccattagccagtttacgaggggag
caaggtccccgtggagagcctggcccaagaggaccacctgggccccctggtttaccaggt
catgggatacctggaatcaaaggaaaaccagggccacagggatatccaggaattggaaag
ccaggtatgcctggaatgccaggaaagccaggagccatgggaatgcctggggcaaaaggc
gaaattggacccaaaggggagattgggcctatggggatcccaggaccgcaaggacctccg
gggcctcacggacttcctggtattgggaagccaggtgggccagggttaccaggacaacca
ggtgccaagggtgagcgaggacccaaaggaccaccaggacctccaggccttcagggtcct
aaaggagagaagggcttcgggatgccaggtttgccaggcctgaagggtcctccagggatg
cacggccctcctggccctgtcggacttccaggagtgggcaaaccaggagtgacaggcttc
cctgggccccagggccccctgggaaagccaggccctccaggcgaacctgggccacaaggc
cctattggggtcccaggagttcaaggacctcctgggatgcccggagttggaaaaccaggc
caggacgggatcccaggccagccaggatttccaggtggcaaaggggagcaaggactgcca
gggctgccaggacccccaggccttccagggatcgggaaaccaggcttcccaggacccaaa
ggtgacaggggtgtagggggtgttcctggggctctggggccaagaggagagaaaggacca
gtaggtgcccccggaatggggggtcctccaggagagccaggcctgcctggaatcccaggt
cccatgggccctccaggtgcaattggttttccaggacccaaaggagaaggtgggattgtg
gggccacagggaccaccaggtcccaagggtgagccagggcttcaaggcttcccaggaaag
ccaggtttccttggtgaagtggggcccccgggcatgaggggtttgccaggtcccataggg
cccaagggggaagctgggcacaaaggtttgccagggctccccggtgccccagggctgctt
ggaccgaagggagaaccaggaatcccgggggatcagggtttgcagggccctccaggcatc
ccagggattgcaggaccgagtggtcccattggaccacctggaattccaggccccaaaggg
gaaccgggcctcccaggccctcctgggttccctggagtagggaagcctggagtagcagga
ctacatggccccccagggaagcctggtgcccttggtccccaaggccagcctggccttcca
gggcccccaggccctcccggccccccaggtcccccagctgtgatgcccccaacaccacca
ccccatggagagtatctgcctgatatggggctgggaattgatggagtgaaacccccccac
gcctatggtgctaagaaaggcaagaacggagggccagcctatgagatgcctgcatttact
gctgagctgactgcacctttcccacctgtgggggcccccgtgaagtttgacaaactgctc
tataacggcagacagaactacaacccacagacgggcatcttcacctgcgaggtccccggg
gtctactactttgcataccatgttcactgcaaggggggcaacgtgtgggttgctctgttc
aagaacaacgagcccatgatgtacacgtacgatgagtacaagaagggctttctggaccag
gcgtccgggagtgcggtgctgctgcttcggcccggagaccgcgtgttcctccagatgccc
tctgaacaggctgcgggactgtatgctgggcagtacgtccattcctctttttcaggatat
ttattgtatcccatgtaa
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