Vicugna pacos (alpaca): 102534937
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Entry
102534937 CDS
T08098
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X2
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102534937 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102534937 (DDX46)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102534937 (DDX46)
Spliceosome [BR:
vpc03041
]
Complex A
U2 snRNP components
U2 related factors
102534937 (DDX46)
Complex B
102534937 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
102534937
NCBI-ProteinID:
XP_006212860
UniProt:
A0A6I9IKK5
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTESGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTTVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccattatcggaagcgatcagcatcacggggacgctctggaagt
agatctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacgatct
agaagcagagatagagacagaaggagagagaggtctcgtagcagggataaaagaagatct
cgatcaagagacaggaagcgtctgaggcgttccagaagtagagagagagaccgaagtcga
gagcgaagaagatcccggagtcgagacaggagacgttccaggagtagaagccggggtcgg
agatcccgatcctccagtcctggcaataaaagcaagaaagctgagaataggtctaggtct
aaagagaaaacagagagtggggagagttctaaagagaagaaaaaagacaaagatgacaaa
gaggatgaaaaagaaaaggatgctggtaactttgaccaaaataagctggaagaagaaatg
agaaagcggaaagaaagagtagaaaaatggcgagaagagcaacgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaagatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaggtgaaagaggaagtaaaa
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctgggccaaca
gtcacaaaagttgtcactgttgtgacaactaaaaaagcagttgtagattcagataagaag
aaaggtgagctcatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gtcgatcttcagacagcccttacaggctatcagacaaagcagagaaagcttctggaacca
gtagatcatggaaaaattgaatatgagccatttaggaaaaacttttatgttgaagttcca
gaactagcaaaaatgtctcaagaggaggtgaatgtatttcggttggaaatggaaggcatt
actgtcaagggaaaaggttgtcccaaaccaattaaatcttgggtccagtgtgggatttcc
atgaaaatcttaaattctctcaaaaaacatggttatgaaaagcccacgccaatccaaacg
caggcgattcctgctatcatgtctggacgagatttgatcggtattgccaagacaggaagt
ggaaagaccattgcctttctgttgcccatgtttagacacatcatggatcagagatcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacag
attacgaaagaatgtaagaagttttcaaagaccttgggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgaacagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctgggcgaatgattgacatgttagcagctaacagtggtcgggttacaaatctt
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggttatgcgcattgttgataatgttcgtcctgatcgacagacagttatgttttca
gcaacttttcccagagctatggaggccttggctcgcagaatcttgagtaaacccattgaa
gtgcaggttggagggagaagtgtggtttgctcggatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagcttcttgagcttctcggccattatcaagaatcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaagatttgatg
agagcttcttatccttgcatgtctcttcacggaggtattgatcaatatgacagagatagc
atcataaatgacttcaagaatgggacctgcaaacttcttgtggctacgtctgttgctgcc
cgaggtctagatgtgaaacatcttattcttgtagtaaattacagctgccccaatcattat
gaggattacgtgcacagagcaggacggactggaagagcaggcaacaaaggttacgcatat
acttttatcacagaagatcaagctcggtatgctggtgacataattaaagcccttgaattg
tcagggactacagtgcctcctgatctagagaaactttggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaaattt
gatgaaacagaacaagctttggctaatgaaagaaagaagttacaaaaagctgctcttggt
ctgcaagattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaggatatggctgctcctggaacatctagtgttcctgct
ccaactgcaggaaatgctgagaagttagaaattgcaaagagattggctcttagaatcaat
gctcagaagaatttgggcattgaatctcaggatgtgatgcaacaggccaccaatgcaatt
ctcagaggtggcaccatcctggctcccactgtatctgcaaaaaccattgcagagcaactt
gctgaaaagatcaatgctaagctcaattatgtgcctttggagaaacaagaagaagagaga
caggatggtggacagaatgaatcttttaagagatatgaggaagaattagagatcaatgat
ttcccacagactgctaggtggaaggttacttccaaggaagctctgcagagaatcagtgaa
tattctgaagctgcaattacaatcagaggaacatatttcccacctggcaaagaacccaag
gaaggagagaggaaaatttacctggcaattgaaagtgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcaccaggctcataaaagaagaactgatccggctgcaaaattcgtac
caaccaacaaataaaggaagatacaaagttttataa
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