Vicugna pacos (alpaca): 102535016
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Entry
102535016 CDS
T08098
Symbol
WIPI2
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04136
Autophagy - other
vpc04140
Autophagy - animal
vpc05010
Alzheimer disease
vpc05014
Amyotrophic lateral sclerosis
vpc05016
Huntington disease
vpc05017
Spinocerebellar ataxia
vpc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102535016 (WIPI2)
04136 Autophagy - other
102535016 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102535016 (WIPI2)
05014 Amyotrophic lateral sclerosis
102535016 (WIPI2)
05016 Huntington disease
102535016 (WIPI2)
05017 Spinocerebellar ataxia
102535016 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
102535016 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102535016 (WIPI2)
03029 Mitochondrial biogenesis [BR:
vpc03029
]
102535016 (WIPI2)
Membrane trafficking [BR:
vpc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102535016 (WIPI2)
Mitochondrial biogenesis [BR:
vpc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102535016 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_RSE1_2nd
BCAS3_WD40
Beta-prop_Vps41
DUF7099
Beta-prop_IFT140_1st
ELYS-bb
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
102535016
NCBI-ProteinID:
XP_031532622
UniProt:
A0A6J3AHC6
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGASQLLFANFNQDVTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCX
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVRLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSISNEHCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
GETTNEILDSTSHDCPLVTQAHSTAAAKGAHVPSSPTTLAYADELGAAGGVCLEDEASAL
RLEEDSEHPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagcggcgaggccggcgccagccagctgctcttcgccaacttc
aaccaggacgtcacgtctctagctgttggtagtaaatccggttataagtttttctccctt
tcttctgtggataaactggaacagatctatgaatgcactgacactgaagacgtgtgcnat
gtggaaaggttgttctccagcagcttagtggccatcgtgagcctcaaagctcccaggaag
ctcaaagtctgccactttaagaagggcaccgagatctgcaactacagctactccaacacc
atcctggccgtgaggctgaaccggcagaggctgatagtgtgcctggaggagtccctgtac
atacacaacatccgggacatgaaggtgctgcacaccatccgggagacgcccccgaaccct
gcgggcctgtgcgccctgtccatcagcaacgagcactgctacctggcgtaccccggcagc
gccaccatcggggaggtgcaggtcttcgacaccatcaacctgagagctgccaacatgatc
ccggcccacgacagcccgttagccgcgctggcctttgatgccagtggaaccaagctcgcc
actgcttccgagaaggggaccgtgattagggtgttttccattccagagggacaaaaactc
tttgagttccggagaggagtgaagaggtgtgtgagcatctgctcgctggccttcagcatg
gatggcatgttcctgtccgcgtccagcaacactgagactgtgcacatcttcaaactcgag
actgtgaaagaaaaacctcaggaggagcccaccacctggacggggtacttcgggaaggtg
ctcatggcatccaccagctacctgccctcccaagtgacagaaatgttcaaccagggcaga
gccttcgccacggtccgcctgcctttctgtggccacaagaacatctgtgcgctggccaca
atccagaagattccccggttgctggtgggagcttccgatgggtacttatacatgtacaac
ctggacccccaggagggaggcgagtgcaccttgatgaagcagcacaagttggatggcagc
ggggagacaaccaacgagatcctggactccacgtcccatgactgccccctggtgactcag
gcccacagcacggccgcggccaaaggtgctcacgtgccttcgtctcccacgacactcgcc
tatgcggacgagctgggcgcggcgggcggcgtgtgtctggaggatgaagccagcgccctg
cggctggaggaggacagtgagcatcctccaatgattctgcggacggactga
DBGET
integrated database retrieval system
