Vicugna pacos (alpaca): 102535020
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Entry
102535020 CDS
T08098
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03015
mRNA surveillance pathway
vpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102535020 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
102535020 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102535020 (PABPC4L)
03041 Spliceosome [BR:
vpc03041
]
102535020 (PABPC4L)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102535020 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
102535020 (PABPC4L)
Spliceosome [BR:
vpc03041
]
Complex C
Other components
Complex C specific factors
102535020 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_7
RBD_DEAH11
RRM_10
RRM_occluded
RRM_MARF1
Nup35_RRM_2
RBD_RDR6
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
102535020
NCBI-ProteinID:
XP_031547903
UniProt:
A0A6J3BQ98
LinkDB
All DBs
Position
2
AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLHADVTEDLLFRKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQ
LADAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDQGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREA
ELQNKANEFTNVYVKNFGDDLDDEKLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKQERFRRCQGAKLYIKNL
DETIDDEKLRREFSSFGSISRVKVMQEEGRSKGFGLICFSSPEEATKALTEMNGRILGSK
PLNIALAQRP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgccaggcctccctgtatgtgggtgacctccatgcagac
gtcaccgaggacctgctgttcaggaagttcagcgctgtggggcccgtgctgtccatccgc
atctgcagggacctggtcacccgccgctctctgggctatgcctacgtgaacttcctgcag
ctggcagatgctcagaaggccctggacaccatgaactttgacctgataaagggcaaatcc
atccgtctcatgtggtctcaacgtgacgcctacttaaggaaatctggaattgggaacgtg
ttcatcaagaatctggacaaatccattgataacaaaaccctttatgagcatttttcagct
tttgggaagatcttatcctctaaagtgatgagtgatgatcaaggctcccggggctatgca
tttgtgcactttcagaaccagattgcggccgacagggccatcgaggagatgaatggggcg
ctgcttaaggactgcaggctgtttgttggcagattcaaaagccgtaaagatcgggaagcc
gagctccaaaacaaagccaatgaattcaccaatgtttacgtcaaaaacttcggagatgac
ttggatgatgagaaattgaaggaagttttcagcaaatatggcaaaaccctaagtgttaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaaaggctgttgaagaaatgaatggaaaggacataaacggacagctgctt
tttgtaggccgggcacaaaagaaagcagagcgacaggctgagttaaagcaaatgtttgag
cagctgaaacaggaaagatttcgtcggtgccagggggcgaagctctatattaagaacctc
gatgagaccattgatgacgaaaaacttcgaagggaattttcttcatttgggtcaattagc
agagttaaggtaatgcaagaagaagggcgaagcaaagggtttggcttgatctgcttctcc
tctcctgaggaggccacgaaagcattgactgagatgaatggccgcatcttgggctccaag
cctctcaacatcgccctggcccagaggccctag
DBGET
integrated database retrieval system
