Vicugna pacos (alpaca): 102535198
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Entry
102535198 CDS
T08098
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04022
cGMP-PKG signaling pathway
vpc04024
cAMP signaling pathway
vpc04740
Olfactory transduction
vpc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
102535198 (CNGB1)
04022 cGMP-PKG signaling pathway
102535198 (CNGB1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102535198 (CNGB1)
04740 Olfactory transduction
102535198 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102535198 (CNGB1)
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102535198 (CNGB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
102535198
NCBI-ProteinID:
XP_031536765
LinkDB
All DBs
Position
9
AA seq
1307 aa
AA seq
DB search
MMGGTGRTLGRPKDSASTGVRMLSWAQKVLPQPPEARRKTKTEEEEGAEPEREPETETAL
EETVLEEESLPPEEPCVGEEVAAPGPQETQEAAPSPPTSLQAQVTVVPEVNSGPSGWVPT
WLRKGLEKVVPQPIHSDRTAQSTAAGLEGAAQAGAQILGHCSTRGSDGPNEAPRAQDTGS
GSWLLRWLEQNVEKVLPQPPKMSEGWRDEPVDAALGPEPPGPSLGTKPEPVLQAQESPSL
PAPDPPEPKEEPTPDPLPSIQTSSLPPAQDSARLVAWLLHRLEMALPQPVLHGKAGEQEP
DTPVMCDVQTISILPEGQEEPDLILEEVDPHWEEDMHQEGSTSLQGSEAAPAAEEENEVV
EQMPRWEPEKALKKVIVWEDYRHMVQNPKVGLCWCWRGRAPPTLPLPSLCSSLQSPGSCL
CLRPPGPSTMAKPGRDMELNRLVQEQQPGHVAPKLAPSNLVEHLPNVPSYRPPITRIPVL
ISRRTALSNSSFAKETRSSIRLLVPATEEHPEVQVEDADADSCPLIAEENPPSPVLPPPS
PAISDTLVVPGSATGSLRKRLPSQDDEAEELRVLSPAVSPVVAWSDPTSPQGTDDQDRAA
STASQNSAIINDRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPAPDVK
PAEAGQVEEEHYCDMLCCKFKRRPWKKYRFPQSIDPLTNLMYILWLFFVVLAWNWNCWLI
PVRWAFPYQTPDNIHLWLLMDYLCDLIYLLDITVFQLRLQFVRGGDVITDKKEMRNNYLK
SQRFKMDMLCLLPLDFLYLKFGVNPLLRLPRCLKYMAFFEFNNRLESVLSKAYIYRVIRT
TAYLLYSLHLNSCLYYWASAYEGLGSTHWVYDGVGNSYIRCYYWAVKTLITIGGLPDPRT
LFEIVFQGLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQ
NRVKTWYEYTWHSQGILDESELMVQLPDKMRLDLAIDVNYDIVSKVALFQGCDRQMIFDM
LKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKAVLVTLKAGSVFGEISLL
AVGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRNNNKPKEKS
VLILPPRAGTPKLFSAALAAAGKMGAKGAKGGKLAHLRARLKELAALEAAARQQRLLEQA
KSSEDPMGEGGSVAPEQPAPSDPPALRSPPPAPQRRPDRDGEGAAQSEEHSVRIHMSPGP
DPSEQVLSVEIPEKKEDEEEKEEEEEEKEEEEEEKEEKKEEEEEKEE
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggaactgggaggactctggggaggcctaaggactctgcctccacaggtgtc
agaatgttgagctgggcccagaaggtgctgcctcagcccccggaggcccgtcggaagacc
aagacagaggaggaggagggagcagaaccagagcgggagccagagaccgaaacagccctt
gaagagactgtcctagaggaagagtccctgccacctgaggagccctgtgtcggggaggaa
gtggctgctccaggccctcaggaaacccaggaggctgccccttctccacctacatccctc
caggcccaagtcactgtggttcctgaagtgaacagtggtcccagcggctgggtgccaacc
tggctcaggaagggcctggagaaggttgtcccacagcccatccacagtgacaggactgcc
cagagcactgctgctggcttggagggtgcagctcaggcaggagcacagatccttgggcat
tgcagcactaggggctcagatggacccaatgaggcccccagggcccaggacaccgggtct
gggtcctggctgctcaggtggcttgagcagaatgtggaaaaagtgctgcctcagcccccg
aaaatgtctgagggctggagagacgagcctgtggatgctgccttgggtccagagccccca
ggaccctccttgggaaccaagcccgagcctgtgctgcaggcccaggagagcccctccctg
cctgctcccgaccccccagagcccaaggaggagccgactccagaccccctgcccagcatc
cagacctcctccctgccacccgcccaggactctgccaggttggtggcatggctcctgcac
aggctggagatggccctgccgcagccagtgctccatgggaaggctggggagcaggagcct
gacacccctgtgatgtgtgacgtgcagaccatcagcatcctccctgaagggcaggaggag
cccgatctcatcctagaggaggttgaccctcactgggaggaggacatgcatcaggagggc
agcaccagcctgcagggctcagaggcagctccagctgctgaagaggagaacgaggtggtg
gagcagatgcccaggtgggaaccagagaaggccctgaaaaaagtgattgtttgggaagat
tacaggcacatggtacagaatcccaaagttggtctgtgttggtgctggcggggaagagcg
ccacctaccctgcctctcccatctctgtgttcctcattgcagtccccagggtcctgcctc
tgcctgagaccccctggccccagcaccatggctaaaccaggccgggatatggagctaaat
cgcctggtccaggaacagcagcctggccatgtggcccccaaactcgccccctcaaacctg
gtggagcatctccccaatgtgcccagctaccgccctccaatcacccgcatccctgtcctc
atctcccggaggacagccttgtccaactccagcttcgccaaggagaccaggagctccatt
cgtctcctagtgcccgccacggaggagcacccagaagttcaggtggaggatgctgatgct
gacagctgccccctcatcgccgaggagaacccaccctcacccgtgctgccgcccccttct
cctgccatatccgacaccctcgtggtcccaggatcggccacagggagcctcaggaagagg
ctgccctcccaagatgatgaggctgaagagctcagggtgctgtcaccagctgtatcccct
gtggtcgcctggtcggaccctaccagcccacagggcactgatgaccaggaccgtgcggcc
tccacggccagccagaacagcgccatcatcaatgaccggctccaggaactggtgaagctt
ttcaaggagcgaacggagaaggtgaaggagaagctcatcgaccctgacgtcacctccgac
gaggagagccccaagccctccccagctaaaaaagccccagagccagctccggacgtgaag
cccgctgaagcagggcaggtggaggaggagcactactgcgacatgctctgctgcaagttc
aaacgccgcccctggaagaagtaccggtttccccagagcatcgacccgctgaccaacctg
atgtacatcctgtggctgttcttcgtggtgctggcctggaactggaactgttggctgatt
cccgtgcgctgggccttcccctaccagacgccggacaacatccacctctggctgctgatg
gattacctgtgcgacctcatctacctcctggacatcactgtgttccagttgcgcctgcag
tttgtccgaggcggggacgtcattacggacaaaaaggagatgcgcaacaattacctgaaa
tctcagcgctttaagatggacatgctctgcctcctgcccttggactttctctacttgaaa
ttcggtgtgaatcccctcctgcgcttgccccgctgtttgaagtacatggccttcttcgag
tttaacaaccgcctggaatccgtcctcagcaaagcctacatttacagggttatcaggacc
acagcctatttgctctacagtttacatttgaactcatgtctgtattactgggcatcggcc
tatgagggcctcggctctactcactgggtttatgatggcgtgggaaacagttacattcgc
tgttactactgggctgtgaagaccctcatcaccattggcggcctgcccgaccccaggaca
ctctttgaaattgtcttccagggtctgaactatttcacgggcgtcttcgctttctccgtg
atgattggacagatgagagacgtggtgggggccgccaccgcgggacagacctactaccgc
agctgtatggacagcacagtcaagtacatgaacttctacaagatccccaggtccgtgcag
aaccgtgtcaagacctggtacgagtacacctggcactcccaaggcatactggatgagtca
gagctgatggtgcagcttccagacaagatgcggctggacctcgccatcgacgtgaactat
gacatcgtcagcaaagtggcgctcttccagggctgcgaccggcagatgatcttcgacatg
ctgaagaggctccgctcggtcgtctacctgcccaacgactacgtgtgtaagaagggggag
ataggccgggagatgtacatcatccaggcggggcaggtgcaggtcttgggtggcccagat
gggaaggctgtgctggtgacgctgaaagctggatctgtgtttggagaaataagcttgctg
gctgttgggggcgggaaccggcgcacggctaacgtggtggcccacgggtttaccaacctc
ttcattctggataagaaggacttgaatgaaattttggtgcattaccccgagtctcagaag
ttgctccggaagaaggccaggcgaatgctgagaaataacaacaagcccaaggagaagagc
gtgctcatccttcctccgagggcgggcacccccaagctcttcagtgccgccctggccgca
gcaggaaagatgggcgccaagggggccaaaggcggcaagcttgcccacctcagggctcga
ctcaaggagctggctgcgctggaggcagctgcacgacagcagcggttgctggaacaggcc
aagagctctgaagaccccatgggagaggggggctcggtcgccccagaacagcctgcaccc
tcggaccctccagccctgcgctctccgccacctgccccccagaggaggcccgacagagac
ggggagggggcagcccagtccgaggagcactcagtgcggatccacatgagcccaggtcca
gaccccagcgagcaggtcctgtcagtggagatcccggagaagaaggaggacgaggaggag
aaggaggaggaggaggaggagaaggaggaggaggaggaggagaaggaggagaagaaggag
gaggaggaggagaaggaggaatga
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integrated database retrieval system
