Vicugna pacos (alpaca): 102535215
Help
Entry
102535215 CDS
T08098
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102535215 (TOPORS)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102535215 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vpc03037
]
102535215 (TOPORS)
Enzymes [BR:
vpc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102535215 (TOPORS)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102535215 (TOPORS)
UBL E3 ligases
102535215 (TOPORS)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102535215 (TOPORS)
Cilium and associated proteins [BR:
vpc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102535215 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
102535215
NCBI-ProteinID:
XP_031532521
UniProt:
A0A6J3AIQ0
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MLKVGILLLRGTILTRHRFSFSCSAVLLRVKGSQQPPGSPLSREEGEAPPAPAPEGRRRS
RRVRLRGSCRHRPSFLGRRELATSAPAGPAPASSEIMASAAKEFKMDNFSPKAGTSKLQQ
TVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHS
VRAEDDFKEYVLRPSYNGSFATPDVRRFRYRTTMTRERSASVYSPSSTVNRRTTTPPDSG
VLFEGLSISGRPRDGEIPSFMRQIAVRRPATADERSLRKIQEQDIINFRRTLYRAGARVR
NIEDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYD
LESQAFVSDLRPFLLNRTEHFIHEFISFARSPFNMAAFDQHANYDCPAPSYEEGSHSDSS
VITISPDEAETQELDINIATVSQAPWDDETPGPSYSSSEQVHAAMSSLLNTSDSSDEELV
TGRATQMQGVQTNEDLNNDSDSSSDNCVIVGFVKPLAERTPELVELSSDSEELGSYEKME
TVKTQEQEQSYSSGDSDVSRCSSPHSVLGKDEQVNKGHCDSGTRIRSKKEEKRSTSLSSP
RDLSSSIRGDRVYSPHTRRHKRKARSRSSDSRSQSRSGHDQKSRRKHHGKKRMKSKRSRS
RESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSSDRGKIRSRSRNRDRYY
LRNNYGSRYKWEYTYYSRNKDRDSYESSYRRRTLSRAHYSRQSSSPECRIQSFSERTNAR
KKNNHSERKYYYYERHRSRSLSSTRSKTASTGLDRVRNEKPGGKRKYKTRHLEGTNEVAQ
PSREFASKMKESHYQKSSSKLDGNCKNESDSFSDSRSSDRETKRKRRKRRTRSLSVEIVF
EGKATDTARHHKKKKKKHKKKHKKHHGDSASRSPVVITIDSDSDKDSEVKVDTGCDLRGP
QDPLQNEFLASLEPFETKDIVTIEDEFSVLGKECDINTLNNLNNANKTVDNILPQTASIE
QTLDVREESAFASDLENQSSDVSIQTEPSRHLPSPRTSLMSVSLGRDHDMS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagtgggtattttgctgcttagggggacaatcttgactcgtcaccggttttct
ttcagttgcagtgcagtattattgcgggttaaggggtcgcagcagccgccggggtctccg
ctgtctcgcgaggagggtgaagcgccccctgctcccgctcctgagggcaggcggagaagt
cgccgggttcgtcttcgcgggtcctgccgtcaccgacccagctttctgggccgccgggag
cttgccacgagcgccccagccgggcctgcgccggcatcctccgagataatggcttcagcc
gctaaggaatttaaaatggacaacttttcacctaaagctggcactagcaaattgcagcag
acagtaccagctgatgcatctcctgattctaagtgtcctatatgcttggatagatttgat
aatgtgtcttacttagatcgctgtttacataagttctgttttcgctgtgtacaggagtgg
tcaaaaaacaaagctgagtgtccactgtgtaaacagccctttgattctattttccattct
gtgagggcagaagacgacttcaaggagtacgtcctaaggccttcgtataatggttctttt
gctacccctgatgttcgccggttccgctatcggacaaccatgacaagggaacgaagtgct
tctgtttattcacctagtagtaccgtgaatagaagaacaacaactccgccagatagtgga
gtactgtttgaagggttaagcatttcaggaagacctagagatggtgaaattccttctttc
atgagacagattgcagtaaggaggccagctactgcagatgaaagatctttgcggaaaatt
caagaacaggatattattaacttcaggcgaactctctatcgtgctggtgctcgagttaga
aatattgaagatggcggacgctacagggatatttctgctgagtttttccgtagaaatcca
gcttgccttcatagattggtgccctggttaaaacgtgaactcacagttctgtttggagct
catggatctctagtgaatattgtccagcacatcatcatgagcaatgttactcgctatgac
ttggaaagtcaggcatttgtgtctgatttaaggccatttttacttaatcggactgagcat
tttatacatgaatttatcagttttgctcgatctccgtttaatatggcagcctttgatcag
catgctaattatgactgccctgctccttcatatgaagaaggcagccattctgattcttca
gtcataacaatatctccagatgaagctgagacccaagaactggatattaacatagccact
gttagtcaggcaccatgggatgatgaaactccaggaccatcttattcaagctcagagcag
gtacatgctgccatgtcttcccttttgaatacatctgacagttcagatgaggaacttgta
acaggaagagccactcagatgcaaggagtacagaccaatgaggacctaaataatgacagt
gattcttcttcagataactgtgtcattgttgggtttgttaaaccactagctgagaggacc
ccagaacttgttgaactgtcctctgattctgaagagttaggatcttatgaaaaaatggag
acagtgaagacacaagagcaagagcagtcttacagttctggtgatagtgatgtcagtaga
tgttcatccccacactctgtgcttggaaaggacgaacaagtaaataaagggcattgtgat
tctggtacaagaatcagatcgaagaaagaagagaaacgatctacgtctttgtcctctccc
agagacctgagctcatccatcagaggagacagagtgtattccccacatacccgcagacac
aagaggaaggcaagatccagaagttccgattcacgttcccagagcaggagtgggcatgat
cagaagagtcgtagaaaacatcatgggaagaaaagaatgaagagcaaacgatccagaagc
agggagagtagcaggcctagaggtagaagagacaaaaagaggtcaagaactagagatagc
agttggtcgagaagaagccagactctgtctctaagtagtgaaagcacaagcaggtcaaga
tctcgtagcagtgatcgtggtaaaataagatcacggagcagaaatagagatcgttactat
ttaagaaataattatggaagcagatacaagtgggagtatacttactatagcagaaacaag
gaccgggatagctacgagtcatcttacaggaggaggactctgtccagagctcattattcc
agacaatcttcaagtccagaatgtagaattcagtccttttctgaaagaacaaatgctagg
aaaaaaaataatcacagtgaaaggaaatattactactatgaaaggcatcgatcaaggagc
ctatctagtactcgatcaaagactgcatctacaggccttgaccgggtgaggaatgaaaaa
cctggcggaaagcgaaaatacaaaactcggcatttagagggtacgaacgaagtggctcag
ccatctcgtgagtttgcttctaaaatgaaggaaagtcattaccaaaaatcttcatcaaaa
ttggatggaaactgcaaaaatgagagtgatagcttttcagacagccgatcatcagacaga
gagacaaaacgcaagaggagaaagaggaggacccggagcctaagtgtagagatagttttt
gaagggaaagctactgatacagctagacatcataaaaagaaaaagaagaaacataagaag
aagcacaagaaacaccatggtgatagtgcttctcgttccccagttgtgattaccattgac
agtgacagtgataaggattctgaagtaaaggtggatacaggatgtgaccttaggggtcct
caagaccctctacaaaatgaatttttggcttctttggaaccatttgaaactaaagatata
gttacaatagaagatgaatttagtgtcctgggcaaggagtgtgatattaacacacttaac
aacttgaataatgccaacaaaactgtagataatattctaccccagacagcttcaattgaa
caaactcttgatgtaagagaagagagcgcctttgcctctgatttggagaaccagtccagt
gatgtgtctattcaaactgagccatcaagacacttgccatctccacggacatctttaatg
tcagtgtctcttggtagagaccatgatatgtcttaa
DBGET
integrated database retrieval system
