Vicugna pacos (alpaca): 102535453
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Entry
102535453 CDS
T08098
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04082
Neuroactive ligand signaling
vpc04721
Synaptic vesicle cycle
vpc04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102535453 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102535453 (SLC6A4)
04721 Synaptic vesicle cycle
102535453 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpc02000
]
102535453 (SLC6A4)
Transporters [BR:
vpc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102535453 (SLC6A4)
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Ortholog
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
102535453
NCBI-ProteinID:
XP_031541222
UniProt:
A0A6J3B7H6
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All DBs
Position
16
AA seq
630 aa
AA seq
DB search
METTPLTSQKELSACKDGEDCQENGVLQKSVSAPGDKVESGQISNGYSAVPSPGAGDDTQ
HSIPAATTTLVAEGHPGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCENSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSAVNCLTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPQLWSKRREWFVLGVVITCFFGSLIT
LTFGGAYVVKLLEEFATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAVSPLFLLFIICSFLLSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYITYRLIIT
PGTLKERIIKGITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccctaacttcccagaaggagctgtcagcgtgtaaggatggagaagat
tgtcaggaaaacggagttctgcagaaaagtgtctctgcccctggggataaggtggagtcc
ggccaaatctccaacgggtactcagcagttccgagcccaggtgcaggagacgacactcag
cactccatcccagctgccaccaccaccctagtggctgagggtcatccaggggaacgggag
acctggggcaagaagatggatttcctcctctcagtcattggctacgccgtggacctgggc
aacgtctggcggtttccctacatctgttaccagaatggagggggggcgttcctcctcccc
tacactatcatggccatcttcggagggatcccactcttctacatggagctcgcgctgggt
cagtaccaccgcaatggatgcatttcgatatggaggaaaatctgcccaattttcaaaggg
atcggttacgccatctgcatcattgccttttacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctctttcacggaccagttgccctggaccagctgc
gagaactcctggaacactggcaactgtaccaactacttctccgaggacaacatcacctgg
acactccactcaacgtccccggcagaagaattttacacgcgccatgtcctacagatccac
cggtctaagggactgcaggacctggggggcataagctggcagcttgccctctgcatcatg
ctgatcttcactattatctactttagcatctggaaaggcgtcaaaacgtctggcaaggtg
gtttgggtgacagctaccttcccttacatcatcctttccatcctgctggtgaggggggcc
accctccccggagcctggaggggagttctcttctacttgaaacccaactggcagaagctc
ctggagacaggggtgtgggtggatgcggccgctcagatcttcttctctctcggtcctggt
tttggggtcctactggcttttgctagctacaacaaattcaacaacaactgttaccaagat
gccctggtgaccagtgcggtgaactgcctgacgagcttcgtttccggatttgtcatcttc
acagtgcttgggtatatggctgagatgaggaatgaagatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccggcatcc
acgttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacgttt
gcaggcttggagggagtgatcacggccgtgctggatgagtttccacaactgtggtccaag
cgccgggagtggtttgtgcttggcgtggtcattacctgcttctttggatccctgatcacc
ctgacttttggaggggcctatgtggtgaagctgctggaggagtttgccacgggacccgca
gtgctcaccgttgccctgatagaagcagttgctgtgtattggttctacggcatcactcag
ttctgcagtgatgtgaaggaaatgctcggcttcagccccggatggttttggaggatctgc
tgggtagctgtcagccctctgtttctcctgttcatcatttgcagttttttgctgagccca
ccacagctacgacttttccaatataactatcctcaatggagtatcatcctgggttactgc
ataggaacctcatctttcatctgtatccctacatacataacttaccggctgatcattacc
ccagggacacttaaggagcgtattattaagggtatcacgccagaaacacctacagaaatt
ccctgtggagacatccgcttgaatgctgtgtaa
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