Vicugna pacos (alpaca): 102535524
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Entry
102535524 CDS
T08098
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04136
Autophagy - other
vpc04140
Autophagy - animal
vpc04211
Longevity regulating pathway
vpc05010
Alzheimer disease
vpc05014
Amyotrophic lateral sclerosis
vpc05016
Huntington disease
vpc05017
Spinocerebellar ataxia
vpc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102535524 (ATG13)
04136 Autophagy - other
102535524 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
102535524 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102535524 (ATG13)
05014 Amyotrophic lateral sclerosis
102535524 (ATG13)
05016 Huntington disease
102535524 (ATG13)
05017 Spinocerebellar ataxia
102535524 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
102535524 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102535524 (ATG13)
03029 Mitochondrial biogenesis [BR:
vpc03029
]
102535524 (ATG13)
Membrane trafficking [BR:
vpc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102535524 (ATG13)
Atg1 complex
102535524 (ATG13)
Mitochondrial biogenesis [BR:
vpc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102535524 (ATG13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
102535524
NCBI-ProteinID:
XP_006212353
UniProt:
A0A6I9IJZ1
LinkDB
All DBs
Position
25
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRPTSEDTGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGTQADQER
VATCTPSDGAHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNVELEDADPMVNPPDSPETTSPLQGSLLSDGSSGGSSGNTQDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaagacagaaaggacctggacaaattcattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggcgagaagatttgtactcgt
tcatcttcatccccaacgggttcagattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcgaagaaggcgctggcagggcagctgcctgccgtcgggagatctatg
tgtgtggagatctcactcaagacttcggagggagattccatggagctagaaatttggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgcagtgtacaacaga
ctgtcattgctgctgaagtctctccttgctataaccagggtgacaccagcttacagactc
tccagaaagcaagggcatgaatatgtcatactgtacaggatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtgggcacccctgtg
ggcaccataactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagacccaccagtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcccct
ccatcccagtgtgtgtttactgtcacaaaggcacattttcagacccctcctcctgtggtg
acggacaccctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttatccagta
gtgtttgctgctggcttaaatgccacacatcctcaccagctaatggttccggggaaggaa
ggtggggtaccacttgctcccaaccagcctgcccatggtacccaagctgaccaggagagg
gtggcaacctgcaccccttctgatggcgcccactgtgctgccacaccttccagcagcgag
gatactgaaactgtatcaaacagcagtgagggacgagcctccccccatgacgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaaacccatcaaccaggtgaccctg
accagtttggacataccttttgccatgtttgctcctaagaatgtggagctggaggacgcc
gatcccatggtgaatcctccagattccccagagactacatctcctctccagggcagcctg
ctgtctgatggctccagtgggggcagcagtggcaacacccaggacgactttgttatgatc
gacttcaaaccagctttttctaaagatgacattcttccgatggacttggggaccttctat
cgtgaatttcagaacccgcctcagctgagcagcctctccatagatattggggcacagtcc
atggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gaatttgatgcctttgtagaaactctgcagtaa
DBGET
integrated database retrieval system
