Vicugna pacos (alpaca): 102535701
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Entry
102535701 CDS
T08098
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03008
Ribosome biogenesis in eukaryotes
vpc03013
Nucleocytoplasmic transport
vpc03015
mRNA surveillance pathway
vpc05014
Amyotrophic lateral sclerosis
vpc05164
Influenza A
vpc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102535701 (NXF1)
03015 mRNA surveillance pathway
102535701 (NXF1)
03008 Ribosome biogenesis in eukaryotes
102535701 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102535701 (NXF1)
05168 Herpes simplex virus 1 infection
102535701 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102535701 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102535701 (NXF1)
03009 Ribosome biogenesis [BR:
vpc03009
]
102535701 (NXF1)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102535701 (NXF1)
mRNA cycle factors
Stress granule specific factors
102535701 (NXF1)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102535701 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
102535701
NCBI-ProteinID:
XP_006214897
UniProt:
A0A6I9IKZ5
LinkDB
All DBs
Position
25
AA seq
618 aa
AA seq
DB search
MADEGKSYNEHYDRVTFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQDTPRVRYNPYSARPNRRGESWHDRDRIHVTVRSDRALPEKGGAGTSLDGASKNWFK
ITIPYGRKYDKSWLLNMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
RENRRISIIINSSPPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKALRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLSGN
ELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDIDAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACYSLSIP
FTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTLHDVNSFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASP
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNDWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcgtacaacgagcactatgatcgagttactttcccgcaaaga
agaaagaaaggccggggccctttccggtggaagtatggcgaggggaatcggaggtctgga
cgagggggttctggcattcggtcttcccgccttgaggaagatgacagagatgtggcaatg
agtgacgcccaggatactccccgagtgcgatacaacccctatagtgcacgacccaaccgt
cggggtgaaagctggcatgatcgagaccgcattcacgtcaccgtgcggagtgatagagct
cttccagagaagggaggggctggcaccagcctcgacggggcctcaaagaactggtttaag
attacaattccttatggcaggaaatacgacaagtcatggctcttgaacatgattcagagc
aagtgcagtgtccctttcactcccattgagtttcactatgaaaacacacgggcccagttt
tttgttgaggacgccagtaccgcctctgcattaaaggctgtcaactacaagattttggat
cgggagaaccgcaggatatctatcatcatcaactcctctcctccgccccacagtgtgcag
aacgaactgaagccagaacaagtggagcagctaaagctgatcatgagtaaacggtacgac
ggctcccaacaagcacttgacctcaaggccctccgttcagacccagatttggtggcacag
aacattgatgttgtcctaaatcgtcgaagctgtatggcagcaaccctgcgaatcatcgaa
gagaacatccctgagctattgtccttaaacttgagcaataacaagctatacagactggat
gacctgtccagcattgtgcagaaagcacccaatctaaagatcctgaatctctctggaaat
gagctaaagtccgagcgggagttggacaagataaaagggctgaagctggaagagctgtgg
ctcgacggaaacaccctgtgcgacaccttccgagaccagtccacctacatcagcgccatt
cgtgaacgatttcccaaattattacgcctggatggccacgagttaccccctccaattgcc
tttgatattgatgcccccacgatgttaccgccctgcaagggaagctattttggaacagag
accctgaagaatctggtcctgcacttcttgcagcagtactatgcggtttatgactctgga
gaccggcagcggctcctggatgcctaccatgatggggcctgctactccctgagcattcct
ttcacccctcagaaccccgcccgaagcaacttggccgagtacttcaaggatagcagaaat
gtgaagaagcttaaagaccctaccctgcggttccggctactgaagcacacacgtctcaac
gtggtggccttcctcaatgagttgcccaaaactctgcacgacgtcaattccttcgtggta
gacataagcgcccagacaagcacattgctatgtttttctgtcaacggagtcttcaaggaa
gtggatggaaagtctcgggactctttgcgagcctttacccggacgttcgttgctgttcct
gccagcaattcagggctgtgcatcgtaaatgacgagctgtttgtgcggaacgccagccct
gatgagatccaaagagcatttgccatgcctgctcccacaccttcctccagcccagtgccc
actctctccccagagcagcaggagatgctgcaggcgttctctactcagtctggcatgaac
ctggagtggtcccagaagtgccttcaggacaacgactgggattacaccagatctgcccag
gcctttactcatctcaaggccaagggcgagatcccagaagtggcgttcatgaagtga
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