Vicugna pacos (alpaca): 102535764
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Entry
102535764 CDS
T08098
Symbol
SS18L1
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03082
ATP-dependent chromatin remodeling
vpc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102535764 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102535764 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102535764 (SS18L1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102535764 (SS18L1)
GBAF(ncBAF) complex
102535764 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102535764
NCBI-ProteinID:
XP_031543515
UniProt:
A0A6J3B8W2
LinkDB
All DBs
Position
19
AA seq
403 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKAAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQSMTLGPGGLSQSGSSQGLHSQGSLSDAIGAGLPPSSLMQ
AQIGNGPNHVSMQQTAQSTLPTTSMSMSGSSHGSGPGYSHSGPASQSVPLQGQGTISNYV
SRANINMQSNPVSMMHQQAASSHYGSAQGGSQHYQGQSMAMMGPSGQGSSMMGQRPLAPY
RPSQQGSSQQYLGQEEYYGGEQYGHGQAASEPVSQPYYPDGHGDYAYQQSSYPEQSYDRP
FEEPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQGYPGQQQGYGEGRSAPSP
YSGYQQGQGQQYRELQSGPRPGPAAPQQRPYGYEQGQYGNYQQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcgtccgcccggccgagaggcaaaggggaggtcacacagcaaacc
atccagaagatgctggacgagaaccaccacctgatccagtgcatcctggactaccagagc
aagggcaaggctgccgagtgcacccagtaccagcagattctgcaccggaacctggtctac
ctggccacgatcgcagactccaaccagaacatgcagtccctgctgcccgccccgcccacc
cagagcatgacgctgggccccggagggctgtcccagagtggctccagccagggcctgcac
tcccagggaagcctcagtgatgccatcggcgcgggcctgccgccgtcctccctcatgcag
gcccagatcggcaacggcccaaaccacgtgtccatgcagcagacggcgcagagcacgctg
cccacgacctccatgagcatgtccggcagcagccacggctcagggcccggctacagccac
tccggcccggcctcgcagagcgtgcctctgcagggccagggcaccatcagcaactacgtg
tctcgggccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcggcc
tcgtcccactacggctcggcccagggcgggagccagcactaccagggccagtccatggcc
atgatgggcccgagcgggcaggggagcagcatgatggggcagcggcccctggcgccctac
cggccctcccagcaaggctcatcgcagcagtacctcggccaggaagagtactacggtggc
gagcagtacggccacggccaggccgcctcggagcccgtgagccagccgtactaccccgac
ggacacggcgattacgcctaccagcagtcgtcctacccggagcagagctacgaccggccg
tttgaggagcccacgcagcactactacgagggcggaaactcccagtacagccagcagcag
gcggggtaccagcagggcacggcgcagcagcagacgtactcccagcagcagtaccccaac
cagcagggctaccccgggcagcagcaaggctacggtgaggggcgctcggcccccagcccc
tactccggctaccagcaggggcagggccagcagtaccgggagctacagagcggccccaga
cccggcccggccgccccgcagcagcggccctacggctacgagcagggccagtacggaaat
taccagcagtaa
DBGET
integrated database retrieval system
