Vicugna pacos (alpaca): 102535836 Help Entry 102535836         CDS       T08098                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188 homolog   KO K14311   nuclear pore complex protein Nup188 Organism vpc  Vicugna pacos (alpaca) Pathway vpc03013   Nucleocytoplasmic transport vpc05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:vpc00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     102535836 (NUP188)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     102535836 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vpc03019]     102535836 (NUP188) Messenger RNA biogenesis [BR:vpc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      102535836 (NUP188) SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like HEAT_SCC3-SA DUF4912 Motif Other DBs NCBI-GeneID:  102535836 NCBI-ProteinID:  XP_031533499 UniProt:  A0A6J3AIB1 LinkDB All DBs Position 4 AA seq 1752 aa AA seqDB search MAAAADDPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAER VKASKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDLLKTVLQDERQSQA LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHQVSSMSQMISAEGMNA GGYGNLLMSSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQSLCICSLAYTEAGQTVINI MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA LTQHGAHGNNLIAVLAKYIYHRHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA FLTRLKSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGNDGSKEFSLGVWSCLH AVLELIDSQQHDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDMLKKFSSEKRFAYWSEYVK SLAVHTADTEGSSCTSLVEYQMLVSAWRMFLIIATSHAEIMHLTDSAVRRQLFLDVLDGT KALLLVPTSVNCLRLGSMMCTLLLILLRQWKRELGSVDDILGPLTEILEGVLQADQQLME KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSATE DKDSMETDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTL EVSLRMKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTVQT PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLMEALDFVGVHQERTLQCLNAVRTV QSLACLEEADHTVGFILQLSSFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH YLQNKNGEGIPSAVGPRAQRPPTAALAAPSCSSSSKQPSPDTQASEQRALHTVQYGLLKI LSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALNFTTPTFDSEVAPSFGTLLATVNVA LNMLGELDKKKEPFTQAVGLSTQVEGARTLKSLLMFTMENCFYLLISQAMRYLRDPAVHP RDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSSSLSKASPESQEPLI QLVQAFVRHVQR NT seq 5259 nt NT seq  +upstreamnt  +downstreamnt atggcggcggccgccgatgatccgtgtgtgaggagcagtagagaactgtggacaattctg ctgggaaggtcagctctgagagaactgaatcagattgaggcagagctgaataaacattgg cagcgtctgttagaagggctttcttactataaacctcccagtccaaattcagctgaaaga gtgaaagctagtaaagatgtagcttcaccgctgaaggaactgggtttaagaatcagcaag tttttgggtcttgatgaagaacagagtgtgcagttactccagtgttaccttcaagaggat tacagaggtactcgggacttactaaagacggtactgcaagatgagaggcagagccaggcc ttaatcctgaagattgcagattattactatgaagaaagaacctgtattcttcgttgtgtc ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgcagac tgtgttgataaattggagaaggagctagttacaaaatatagacagcagtttgaagagctt tataaaactgaagcaccaacatgggagacacatggaaacctcatgactgagcgtcaggtg tctcgctggtttgttcagtgccttcgggagcagtccatgctgctggaaattattttcctt tattatgcgtactttgagatggcacctagtgacttattggtattaaccaagatgtttaaa gagcaaggatttggtagcaggcagactaataggcacctggtggatgagaccatggatcct tttgtggatcggattggctactttagtgcccttatcctggtggaaggcatggatattgag tccttgcataagtgtgctttggatgacagaagagaactgcaccagtttgcgcaggatggg cttatctgtcaggatatggaccgtttgatgttgacctttggggacattccacatcatgcc ccagtgcttttggcctgggctctcctccgtcacaccctgaatccagaagagacaagcagt gttgttcggaagatagggggcacagccatccagctgaacgtatttcagtacttgacccga ttactccgctcactggccagtgggggaaatgattgtaccaccagcactgcgtgcatgtgt gtgtacggactcctttctttcgttctgacctcgctggagctgcacacactgggcaatcag caggatgtaatcgacacagcatgtgaagtcctggcagacccttctcttccagaactattc tggggaacagagccaacctctggtcttggaatcattctggacagtgtatgtggaatgttt ccccatctcctctccccactcctgcaattgctgcgagcccttgtatcagggaagtctact gccaagaaggtatatagcttcttggataagatgtctttctacaatgaactttataagcac aagccccatgatgtgatctcccatgaagatggaactctctggcggaggcagacacccaag ctcctttaccctctcgggggtcagaccaaccttcgcatacctcagggcactgtgggtcaa gtaatgctggacgacagggcttacctggtacgctgggaatactcctatagcagctggacc cttttcacctgtgagattgaaatgctgcttcatgttgtttccactgcagatgtgattcag cactgccagcgggtcaaacccattattgatctggtccataaagttatcagtacagatctg tcgatagcagactgtctcctgcccatcacgtcccgcatctacatgctgctgcagcgatta acgaccgtgatctcccctcctgtggatgtcattgcttcttgtgtcaattgcttgactgtt ttggctgcccggaacccagcaaaggtctggactgatcttcgccacacaggctttttacct tttgtggcccaccaggtctccagcatgagtcagatgattagtgcggaggggatgaatgct ggaggatatggaaacctcttgatgagtagtgaacagcctcagggcgagtatggggtcact gttgcctttctgcgcttgatcaccactcttgtcaaggggcaacttggtagtacgcagagc caaggactggtgccctgtgtcatgtttgtgctgaaggagatgcttccgagctaccacaag tggcgttacaactcccatggtgtgagagaacagattggttgcctgatcctggagctgatt catgcaatactgaacctgtgccatgagacagacctgcacagcagtcacacacccagtctg cagtctctctgcatctgcagcctggcctacacagaagcaggacagacagtgatcaatatc atgggcattggcgtggacaccattgacatggtgatggctgctcagccccgcagtgatggg gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtc accaacaatgttattcggctgaaacctccttctaatgtggtgtcccccttggaacaggct ctcacacaacatggtgcccatgggaataaccttattgctgttcttgccaaatacatctac cacagacatgaccctgccttgccacgccttgccatccagctactgaaacgtctggccacg gtagccccaatgtcagtgtatgcctgcctgggcaacgatgcagctgccattcgtgatgct ttcctgacccgactgaagagcaagattgaggacatgcgcatcaaagtcatgattctggaa ttcctcacagttgctgtagagactcaaccaggcctcattgaactgtttctgaatctggag gtgaaagatggcaatgatggctccaaggaattcagccttggggtgtggagctgtctccac gccgtgctggagctaattgattcccagcaacacgatcgctactggtgccccccactgctg catcgtgcggccattgcctttctgcatgctctgtggcaggaccgtcgggacagtgccatg ctggtcctcagaaccaaacccaagttttgggagaatttaaccagtccactctttggaacc ctttctcctccctcagaaacatctgagcccagcatcctggaaacctgtgccctaatcatg aagataatttgcttggagatatactatgtagttaagggctcattagaccagtcattaaaa gatatgctcaagaagttttccagtgagaaacgctttgcctactggtcagagtatgtcaag tccttagcagttcacaccgctgacacagagggcagcagctgcacctccctggtagaatat cagatgttggtctccgcctggaggatgtttctcatcattgccaccagtcacgcagagata atgcacctgaccgactctgccgtacgtcgccagctctttcttgatgtgctcgatgggacc aaagcgttactcctagtccccacctctgtgaactgcctccgcctcggctccatgatgtgc actctgctgcttatcctcctccggcagtggaagagagagttaggttctgtggatgatatc cttggacccttgacagagatcctggagggagtgctgcaggcagaccagcaactcatggag aagaccaaggccaaggtgttctcagcattcatcacagtgctgcagatgaaggagatgaga gtgagtgacatcccccagtactcccagctggtgctgaacgtctgtgagaccctccaagaa gaggtgatcgcactcttcgaccagacccgccacagtctggcgtcaggcagtgccacagag gataaggacagcatggagactgacgactgctcccggccccggcacaaggaccagcgtgac ggggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggatggt gactcatggctgcaggtgacccgcaggctccccatcctgccaaccctcttcaccaccctg gaggtgagccttcgcatgaagcagaacctgcatttcaccgaggccgcgctgcacctgctc ctcacgctggctcgcacgcagcagggagccacagcagtggctggcgctggcatcactcag agcatttgtttgccgctcctgagtgtgtaccagctcagcaccaatgggacagtgcagaca cccagcacctctcggaagtccctggacgccccctcttggccgggggtctaccgcctgtcc atgtctttaatggaacggctcctcaaaactctgcgctacaatttcctgatggaggccctg gacttcgtgggtgttcatcaggagcggaccttacagtgcctcaatgcggtgaggacggtg cagagtctggcatgcctggaggaggcggatcacaccgtgggcttcatcctgcagctgtcc agcttccggaaggagtggcacttccacctgcctcagctcatgagagacgtccaggtaaac ctgggctacctgtgccaggcctgcacctccctcctgcacagccgcaagatgctgcagcac tacttgcagaacaaaaacggggagggcatcccttcagctgttggcccccgagctcagcgg ccacccacagccgccctggctgctccctcctgctcctcctcctccaagcagcccagtcca gatacacaggcttcagagcagcgagccctgcacacggtccagtacggcctcctcaagatc ctcagcaggaccctggcagccctgcgccacttcaccccggacgtctgtcagatcctgctg gatcagtccctggacctcgctgaatacaacttcctgtttgccctgaacttcaccactccc acctttgactctgaagtggccccctccttcggaacccttctggccacagtgaatgtggcc ctaaacatgcttggagagctggacaaaaaaaaggagccgttcacccaggcagtggggctc agcacacaggtggaaggggccagaacactgaagtccctcctgatgttcaccatggagaac tgcttttacctgctcatctcccaggcaatgcgttaccttagggacccggctgtgcaccct cgggacaagcagcggatgaagcaggagctcagctcggagttgagcacgctgctctccagc ctctcgcgctacttccgccgaggagcccccagctctcctgctgctggcgtcctcccctca cctcagggcaagtcctcttctctctccaaggccagccccgagagtcaggagcctctgatc cagttggtgcaggcctttgtccgacacgtgcaaagatag

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