Vicugna pacos (alpaca): 102535850
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Entry
102535850 CDS
T08098
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X2
KO
K17890
autophagy-related protein 16-1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04136
Autophagy - other
vpc04140
Autophagy - animal
vpc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102535850 (ATG16L1)
04136 Autophagy - other
102535850 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102535850 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102535850 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
vpc03029
]
102535850 (ATG16L1)
Membrane trafficking [BR:
vpc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102535850 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
102535850 (ATG16L1)
Mitochondrial biogenesis [BR:
vpc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102535850 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
ZapB
TolB_like
APEH_N
Fez1
Beta-prop_WDR19_2nd
CCDC93_CC
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
102535850
NCBI-ProteinID:
XP_006209190
UniProt:
A0A6I9ICV6
LinkDB
All DBs
Position
5
AA seq
523 aa
AA seq
DB search
MAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQKDKEMQMNEAKIAECLQTISDLETE
CLELRTKLQDLERANQTLKDEYDALQITFTALEEKLRKTTEENQELVTRWMAEKAQEANR
LNAENEKDSRRRQARLQKELAEAAKEPLPIEQDDDIEVIVDETSDQTEETSPVRAISRAA
TKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSSKEVRVPTTAMYVFDAHDGE
VNAVQFSPGSRLLATGGMDRRVKLWEVFGDKSEFKGSLSGSNAGITSIEFDSAGSYLLAA
SNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIK
TVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELL
SCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVL
SGKVEKVLSKHHSSSINAVAWSPSGSHVVSVDKGSKAVLWSEY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgaggattaaacaccaagaagaactgaccgaattacacaagaaacgtggg
gagttggctcagttggtgattgacctgaataaccaaatgcagcagaaggacaaagagatg
cagatgaatgaagccaaaattgcagaatgtttgcagaccatctctgacctggagactgag
tgcctagaactacgcactaagcttcaggaccttgaaagagccaaccagaccctaaaggat
gagtacgatgccctgcagatcaccttcactgccctggaggagaaactgcggaaaactact
gaagagaaccaggagctggtcaccagatggatggctgagaaagcccaggaagccaaccgc
ctgaatgcagagaatgaaaaggattcgaggcggcggcaagcccggctgcagaaagagctt
gcagaagcagcaaaggaacctctaccaattgagcaggatgatgacattgaagtcattgtg
gacgagacctctgatcagaccgaggagacctctccagtgcgagccatcagcagagcggcc
actaagcgactctcgcagcctgctggaggccttctggattctatcactaatatctttggg
aggcgctctgtctcttcctttccagttccccaggataacgtggatactcatcctggttct
agtaaagaagtgagggtgccaacaactgccatgtatgtctttgacgctcacgatggggag
gtcaacgctgtgcagttcagtccgggttcccggcttctggccacaggaggcatggatcgg
agggtgaagctttgggaagtgttcggagacaaatctgagttcaagggttccctctccggc
agtaatgcaggaattacaagtattgagtttgatagtgctggatcttacctcttagcggca
tcaaatgactttgcaagccgaatctggactgtggacgactatcggttacggcacacactc
acaggacacagtggcaaagtgctgtctgccaagttcctgctggacaatgcgcgtattgtt
tctggaagtcatgaccggaccctcaaactctgggatctacgcagcaaagtctgcataaag
acggtatttgcgggatccagctgcaatgatattgtctgcacggagcagtgtgtaatgagt
ggacattttgacaagaaaattcgcttctgggacatccgatcagagagtattgtccgagag
atggaactcttgggaaagattactgccctggacttaaacccagagagaaccgaactcctc
agctgctcccgtgatgacctgctaaaaattattgacttacgaataaacgcggtcagacag
acattcagtgctcctggcttcaagtgcggttctgattggacgagagttgtgttcagccct
gacggcagttacgtggcagccggctcggccgagggctctctctacatctggagcgtgctc
tctgggaaggtggagaaggtcctttcaaagcatcacagctcgtcaatcaacgcggtggcc
tggtccccctccggctcccacgtcgtcagtgtggacaaaggaagcaaagctgtgctgtgg
tcagaatactga
DBGET
integrated database retrieval system
