Vicugna pacos (alpaca): 102536062
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Entry
102536062 CDS
T08098
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102536062 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102536062 (VPS8)
Membrane trafficking [BR:
vpc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102536062 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
102536062
NCBI-ProteinID:
XP_006201078
UniProt:
A0A6I9I2U5
LinkDB
All DBs
Position
1
AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSLCAKTADEELNKSFNLEASLSKFSYIDLDKELELKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDAIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVAADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLLVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLKPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIHINQE
SLQISPCITEQFIELLCQFSPNQVIDTLQVLECYRLEETVQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLERLQSKLQEITHQDESTKEDSSLKDVEETMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSSSAAPPLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIEIEGQTRWTCYKCSSSNKVGKLSE
NSSEIKKGRITPSQVKVSPSCHPSKGDPAVKKAASEPVLDPQQIQAFDQLCHLYRGSSRL
ALLTELSQNRSSDSYRPFGGSQSGSAFNSIFQKENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccacgaaaatgtggaacaaagcctctgtgccaagactgctgat
gaagaactgaataagtccttcaatctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagctcaaaaatgacctgattgatgataaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactcaatgaaactgatgatgaagatgaa
tcttttgttcttgaagatcctacattgttaaacatcgatgctattgattctcactcctat
gatacttcgtctgtggcaagctcagatagtggtgacaggaccaacttaaaaaggaaaaag
aaattacctgattctttttcactccatggatcagttatgcgacattcacttttaaaggga
atttctgctcagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggattggctttgatatttggaaaa
gatcagaatcaagctttgcgactctgtctgggtagcactagtgttgggggccaatatgga
gccatctctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaaa
ggacagatcactatgtgggatttggccagtggaaaacttctaagatcaataacagatgct
catcctccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatt
tgcaacgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgaga
acatgtgaatctaggtgcctcttcagtggttctaagggcgaagtttgctgtattgagcct
ctccattctaagcctgagttgaaagatcatcccatcacacagttttccttattggccatg
gcatccttaacaaagatactggtcattggattgaagccatccttgaaagtgtggatgact
tttccttatggacggatggatccttccagtgttccactgttggcctggcactttgtggca
gtgcataattacgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctg
ttggttaagagagacgaatctggagcaatacatgttactaagcaaaagcatcttcacctg
tactatgacctcatcaactttacttggataaactcacgcacaattgtgctcttggacagt
gtagagaagttgcatgtgattgatcggcaaactcaagaggaattggagacagtggagatc
tcagaagttcagttggtctataatagcagccatttcaaatcactagccactggaggaaat
gtgagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgaggagctgg
agagagagagtggatcacctcctgaaacaagattgtctcacggaagccttggctctcgca
tggtcttttcatgaaggaaaagcaaaagcagtagtgggattgtcaggggatgccagtaag
agaaaggctgttgctgcagatcggatggtagaaatcctattccattatgcagatcgagct
ctgaaaaagtgcccagaccaggggaaaatccaagtgatggagcagcattttcaggatatg
gtgcctgtcatagtggattactgccttctgctacagcgaaaggatcttttatttagccag
atgtatgacaaattaagtgagaattctgtggccaaaggagtgtttttggagtgccttgaa
ccatatattttaagtgataaattggtggggatcacacctcaggtaatgaaagacttgctt
gttcatttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagtctagatattcagcaggtagttctcatgtgttgggaaaatcggctatatgat
gctatgatctatgtgtacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttccgagtcattgctcctccactgaatgcagggaagacgctaacagatgagcaagttgtt
atgggcaacaagcttcttgtatatattagctgttgtctggcaggtcgtgcctatcccctt
ggtgacatccctgaagatcttgtgcccttggttaaaaaccaggtttttgaatttctaatt
cgcctgcattcagcagaagcttcccctgaggaagaaatctatccctatattcgaactttg
ctacattttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagctgtagaatatcaacaacgtattgtggatattttgttgaaagttatg
gtggagaattcagattttactccctcacaagtagggtgtctctttaccttccttgcccgg
cagcttgcaaagcctgacaacaccttgtttgtaaacagaaccctttttgatcaggtcctc
gaattcctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcagtttgaagagagtcggctcatccgtatggca
gaaaaagcagagttctatcaaatttgtgaatttatgtatgaacgagaacaccaatatgac
aaaattatcgattgctacctacgtgacccactaagagaggaagaagtctttaactacatt
cacaatatcttatccatccctggacacagtgcagaggagaagcaatctgtatggcagaaa
gcaatggaccatattgaggaacttgtgtccctgaagccttgtaaagctgcagagctggtt
gctactcacttttctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttg
cttttcaaatttttgaggagtcttcttgatccaagagaaggtattcacataaatcaagaa
tcgctgcagatctctccctgtatcacagagcagttcattgagctgttgtgtcagttcagc
ccaaaccaggttatagacacactgcaagtccttgagtgctaccgcctagaagaaaccgtc
cagattacccagaagtatcaacttcatgaagtcactgcttatctattagaaaagaaagga
gatattcatggtgccttcttaataatgctagagagactacaaagcaaacttcaagagata
acacatcaagatgaaagtaccaaagaggattcctcattgaaggatgttgaggagaccatg
gtagagacaattgccctttgccagagaaattcacataatttgaatcagcagcaaagagag
gcactgtggtttccattactggaggcaatgatggcccctcagaagctgtctagttcagcc
gcacctcctctacactctgaagctctgaaatctttgaccatgcaagttctaaacagcatg
gcagcatttattgcccttccatcaatcctgcaaagaatcttacaggacccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgctggatacctttaactat
gaacagaccctgctggaaacaactactagccttctaaaccaagatctccattggtcgttg
tgtaacctgagagcttccgtcaccagaggactgaatcccaagcaggattactgctctatt
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaattattgtctttagctgt
ggtcatttgtatcactcattctgtctgcaaaacaaagagtgcaccatagaaattgaagga
caaacgagatggacatgctacaaatgcagctcaagtaacaaagtaggaaagttaagtgaa
aattcatctgaaattaaaaagggaaggataacgccatcacaggtaaaagtgtccccatcc
tgtcatccatccaaaggagatcctgctgttaagaaggcagcctcagaacctgttctggat
ccacagcaaatccaagcatttgatcagctttgccatctctaccgaggaagttccaggctg
gctctccttacagaactctcccagaatcgcagcagtgacagctacaggccgttcggtggc
tcccagagtggctctgccttcaacagcatcttccagaaggagaacttccagctgcagctc
attcccccgcccgtgacggaggactga
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integrated database retrieval system
