Vicugna pacos (alpaca): 102536140 Help Entry 102536140         CDS       T08098                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism vpc  Vicugna pacos (alpaca) Brite KEGG Orthology (KO) [BR:vpc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:vpc03009]     102536140 (PDCD11) Ribosome biogenesis [BR:vpc03009]  Eukaryotic type   90S particles    Other 90S particles     102536140 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 OB_RRP5 HAT_PRP39_N Spt6_S1 HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_Syf1_CNRKL1_C OB_RRP5_4th Suf TPR_14 TPR_19 ARM_TT21 TPR_CcmH_CycH TPR_15 UTP6_C NRDE-2 ARM_TT21_5th DUF7017 DUF2110 DUF4666 Motif Other DBs NCBI-GeneID:  102536140 NCBI-ProteinID:  XP_006216414 UniProt:  A0A6I9ILT2 LinkDB All DBs Position 11 AA seq 1875 aa AA seqDB search MATMEESFPRGGTRKTHKSEKAFQYSVEHDNLFDISTEEESTKRKKNQKGPAQTKKLKIE KRESSKFVREKFEILNKESLCEGMRILGCVKEVNELDLVISLPNGLQGVVQVTEICDAYT EKLNEQVAQEEPLQDLVGLPELFSPGMLVRCVVSSLSITQRGKKNIKLSLNPKNVNKVLS AEALKSGMLLTGTVSSLEDHGYLVDIGVGGARAFLPLQKAQEYIRQKNKGAKLKVGQYLN CTIEEVKGNGGVVSLSIGHSEVSAAIATEEQNWTHNNLLPGLVVKAQVQKVTPLGLTLKF LSFFTGLVDFMHLDPKKAGTYFSNQPVKACVLCVHPQTRAVRLSLRPIFLHPGRPLPRLS CQQLGAVLDDVPVQDFFPNIGATFRLKDGALAYAWLSHLSNSKKLFKPETFKPGNTHKCR IIDYSQMDELALLSLRTSIIEAQFLWYHDIKPGVLVKGTVLTIKPYGILVKVSKQVRGLV PPMHLADILMKNPEKKYHIGDEVKCRVLLCNPEAKKLIMTLKKTLVESKLPAITCYADAK PGLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPESVFYTGQVVKVVVLSCE PSKERMLLSFKLSSDPKKECAGHSQKKRRVINAGQLVDVKVLEKAKDGLKVAVLPHNIPA FLPTPHLSDHVANGPLLYHWLQAGDTLHRVLCLSEHDEHVLLCRKPALVSAVEGGQDPKS FSEIHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAK VTNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLTQCLEERQGIRSLMSNRDSVLIQTLAE MTPGMLLDLEVQEVLEDGCVLFSEGPVPGLVLRASRYHRAGQEVESGQKKKVVILSIDML KLEVHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDT FHFDSEKLQVGQGVSLTLETTEPGVTGLLLAVEGPAAKRTMRKTRKDSETVDEDEEVDPA LVVGTIKKHTLSIGDVVTGTVKSIKPAHVVVTLEDGIIGCIHASHILDDVPVGTAPTSKL KVGKKITARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELEKDGHTALNTHSVSPLE KIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQ ALKATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPFGKIGRVSIF HVSDSYSETPLEDFTPQKIVRCYVLSTTDPELTLSLRSSRTNPETKSKIADPEINSIQDI EKGQLLRGYVKAVQPSGVLLSLGPSVMGLAQYPHVSQYSPAKSTLYDKHLPEGKLLTAKV LSVNHRGDLVELSFLPRDTGKPDVFPASLGLPLRKQDERETGAEERDHRGEEKKGKRKSQ KRKEKSNGQGPEEVQLPSKEKKVPQKPQAKKPGKRPHPESGSEQEHVNKKQKKAAPSEED DSGVEVYYREGEEEMEEPSVPPRKKHPRPAEAPRLQLSSGFVWDVRLDSLTPALPPHRES SDSEEEEKPEQATQKKSKKERELEKQKAEKELARIEEALMDPGRQPESADDFDRLVLSSP NSSILWVQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQES LTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLL RRGQAGASHRVMQRALECLPKKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTD VWSVYIDMIIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKA KALEYVEAKSSVLED NT seq 5628 nt NT seq  +upstreamnt  +downstreamnt atggcaaccatggaagaaagcttcccccgagggggtacaagaaagacccacaaatcagag aaagctttccagtactcagttgaacatgacaacttatttgatatttctactgaagaagaa tccaccaaaaggaaaaagaaccagaaaggaccagcacaaacaaaaaagttgaaaattgaa aagagagaaagcagcaagtttgtaagagagaagtttgaaatccttaataaggagtcccta tgtgagggaatgcggattctgggttgcgtgaaagaggtaaatgaactggacctggtgatt agcctccccaatggcctccagggggttgtgcaagtgactgaaatctgtgatgcttacact gaaaagctgaatgagcaggtggcacaagaggaacctctgcaggacctggtcggcttgcct gagctcttctcacctggaatgctggtgagatgtgtggtgagcagtctgagcatcactcag aggggcaaaaagaatatcaagctatctctgaaccccaaaaatgtcaacaaagtgctgagt gctgaagccctgaaatccggcatgctgctcacaggcactgtgtccagcctggaagaccat ggttacctagtggacattggtgttggtggggccagagcttttctgccactgcagaaagcc caggagtacatccgacagaagaacaaaggtgctaaattgaaggtgggccagtacctgaac tgcaccattgaggaggtgaaaggcaacgggggagttgttagtctgtctattggtcattca gaagtttctgctgccattgccactgaggagcaaaactggacccacaataacctgctacca ggattggtggtcaaagcccaggtacagaaggtgactccacttggccttacgctgaaattt ctctcattcttcactggcctggttgactttatgcacctggatcccaagaaagctggaaca tatttctcaaatcagccagtaaaggcctgtgtcctctgtgtccatcctcagaccagagct gtacggctgagcctgcgccccatcttcctgcatcctgggcgcccactccctcgactctct tgccagcagctgggagctgtgctggatgatgttcctgtccaggactttttccccaacatt ggggccaccttcaggctgaaggatggggctctggcctatgcctggctcagccatctctcc aattctaagaaactcttcaaacctgagaccttcaagccaggaaacactcacaagtgtaga atcattgactacagccaaatggatgaactcgctttgctctctctgcggacgtctattatt gaagctcagttcctttggtatcatgacatcaaacctggggtcttggtaaagggcacggtg ctgaccataaagccatacgggatactggtgaaggtgagcaagcaagtcagaggcctggta ccccctatgcacctggctgacatccttatgaagaatccagagaagaagtaccacattggg gatgaagtcaagtgccgggttttactttgtaacccagaagccaagaagctgataatgacc ctgaagaagaccctggttgaatccaaactgcctgccattacctgctatgctgatgccaag cctgggctacagacacatggctttatcctcagggtcaaggactatggctgcattgtgaaa ttctacaatgatgtgcagggattggtgcccaagcatgagctcagtgccgagtatgtccct gacccagagagtgtcttttacactggccaggtggtgaaggttgtggtgctgagctgtgag ccatccaaagagaggatgctcttgtcatttaagctgtcgagtgatccaaagaaagagtgt gcgggacacagtcagaaaaaaagaagagtcattaacgccgggcagttggtggatgtgaag gttttagagaaggccaaagatgggctgaaggtggctgtcctgccccacaacatccctgcc ttcctccctacgcctcatctgtcagaccacgttgccaatggcccactgttgtatcactgg ctccaggcaggcgacacccttcacagagtcctgtgtctgagcgagcatgacgaacatgtt ctcctttgcaggaagccagctttggtctctgcagtagagggtggccaggatcccaagagc ttctcagaaatccatcccggaatgctgctcattggttttgtgaagagcatcaaggactac ggtgtgttcgtccaattcccctcaggtcttagtggactggcccccaaggctatcatgagt gacaagtttgtgacctccacaagtgaccactttgtcgaggggcagacggtggtggcaaag gtaaccaatgtggacgaggagaagcagcggatgctgctgtcactgcggctgtcagactgc accctgggggacctggccaccaccagcctcctcctcctgacgcagtgcctggaggagcgg cagggcatccgtagcctcatgagcaaccgagactctgtgctgatccagacgctggccgag atgactccagggatgctccttgacctagaggtgcaggaggtgttggaagatggctgtgtg ctgttcagtgagggcccagtgcctggcctggtgctgagggccagcaggtaccatcgggca gggcaggaggtggaatctgggcagaaaaagaaggttgtaatcttaagcattgacatgttg aagttggaagtacatgtttctctctgccatgatttggtgaatagaaaagctaaaaagctg aagaaaggcagtgagcaccaggcgatcgtgcagcacttggaggagtcctttgctgttgcc tccttggtagagactggccacctagcagctttctccctgacctctcacctcaatgacacc ttccactttgactcagaaaagttgcaggtgggacagggtgtctctttaaccctcgagacc acagaaccgggggtgaccggtcttcttttggccgttgaggggccagctgctaagaggacc atgagaaagacccggaaggactctgaaacagtcgacgaggatgaggaagtggatccggct ctggttgtagggactataaagaagcacaccctgtccattggggacgtggtcacagggact gtcaagtccattaagcccgcccatgtggttgtgaccctggaagatggcatcattggctgt atccacgcctcccacattctcgatgatgttccagtggggacagctcctacctccaagctg aaagttgggaaaaagatcactgcccgagtgattggcgggagagacatgaagacattcaag tttctcccaataagtcatcccagatttattcgaaccatcccggagctgagtgtccggcca agtgagctggagaaggatggccacactgctctcaacactcactctgttagccccttggag aagattaaacagtaccaggctggtcagaccgtgacttgcttcttaaagaagtacaatgtg gttaagaaatggcttgaggtggagattgctccagacatccgagggagaattccgttgttg ctcacttctcttagcttcaaggttctgaaacatccagataagaagttccggattggccag gccctgaaggccactgtggttggcccagattcctccaaggccttcttgtgtctctcactc ataggtcctcacaagcttgagaaaggggaagtggccatgggccgagtagtgaaggtgact cccaaggaggggctgacagtctccttccccttcgggaagatcggaagagtcagcatattt cacgtgagtgactcctactcagagacgcccctggaagactttaccccacagaagattgtc aggtgttacgtcctgtccaccacggatcctgagttgactttgtcgctgcgatcgtccagg acgaacccggagacgaaaagcaaaatagcagaccccgagattaactccatccaggacatt gagaaagggcagctcctgaggggctacgtgaaggccgtccagccgtccggtgtgctcctc agccttggtccctcagttatgggtttggcccagtacccgcacgtgtcccagtacagccca gccaagagtaccctgtatgacaaacacctccccgaagggaagctgctcacagccaaggtc ctaagcgtgaaccaccggggggacctggtagagctgtcatttctcccccgcgacactggg aagccggacgtgtttcctgcctccctaggactgcccctccgaaagcaggacgagagggaa acaggggcagaggagagagaccacagaggagaagaaaagaaggggaaaaggaagagtcag aagaggaaggagaagagtaatggtcagggcccggaggaggtgcagctgcccagcaaggag aagaaggtgccccagaaaccgcaggcaaagaagccgggcaagcggccacacccggagtct ggaagtgagcaggaacacgtgaacaagaagcaaaagaaagctgctccatctgaggaggat gacagtggtgtcgaagtgtattaccgggaaggggaagaggagatggaggagccgagtgtg ccgcccaggaagaagcaccccaggccagcagaagcaccccggctgcagctgtcctctggc ttcgtttgggacgtgaggctggactctctgaccccggccttgccacctcacagggagagc tcagacagcgaggaggaagagaagccagagcaagccacgcagaagaaaagcaagaaggaa agggagctggagaagcagaaggcggagaaagagctggcccgcatagaggaggcgctgatg gaccctgggcgacagccggagtcggcggatgactttgaccgactcgtactaagctccccc aacagctccatcctgtgggtgcagtacatggccttccacctgcaggccacggagattgag aaggcccgggctgtggccgagagggcactcaagaccatctccttcagagaggagcaggag aagctgaacgtgtgggtggcactgctgaacctggagaacatgtacggctcccaggagtcc ctgaccaaggtcttcgagcgggccgtgcagtacaatgagccgctgaaggtctttctccac ctggctgacatctacaccaagtcagagaaattccaggaagctggtgaactctacaaccgg atgctgaagcgtttccggcaggagaaagctgtctggatcaaatacggcgcctttcttctg cggagaggccaagctggagccagtcaccgtgtgatgcagcgagccctcgagtgcctgccc aagaaagagcacgtggatgtgattgccaagtttgcccagcttgagttccagctgggggat gcagagcgggccaaagccattttcgagaatacgctgagcacctacccaaagcgcacggat gtctggtcggtctacattgacatgatcatcaagcatggcagccagaaggaagtccgggac atctttgagcgggtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaag cgctacctggactacgagaagcaacacggcaccgagaaggacgtgcaggcagtaaaggct aaggccctggaatatgtggaggctaagagctccgtgttggaggactag

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