Vicugna pacos (alpaca): 102536160
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Entry
102536160 CDS
T08098
Symbol
ZC3H12C
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102536160 (ZC3H12C)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102536160 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
DUF3723
Motif
Other DBs
NCBI-GeneID:
102536160
NCBI-ProteinID:
XP_031531395
UniProt:
A0A6J3AAN4
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MGLKDHPGHDLDHLHVDSTDPRVSASVPWSMVEKPTMDKVHSGKEEKEVSEENVSSGDSE
ESTNSDNESEPVSSAPAEPCSLTKTHRQLCRSPCLEPHILKRSDVLQDFKPEESQATSKE
ARKPPDVVREYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSEAEQT
VSTVTSLMRETSSLESQRSESPMQEVAADDGENLRPIVIDGSNVAMSHGNKEVFSCRGIK
LAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKVLVFTPSRRVQGRRV
VCYDDRFIVKLAFESDGIIMSNDNYRDLANEKPEWKKFIEERLLMYSFVNDKFMPPDDPL
GRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGSQPQRSVADELRAMS
RNTAAKTASEGGLVKSNSVPCSTKADSTSDAKRGAPKRQSDPSIRTQGYQDLEEKLPTKN
KLETRSVPSLVSIPAASPAKPQSTTSLSNGLPSGVHFPPQDQRPQGQYPPMMMATKTHGT
PMPYEQYPKCDSPVDVGYYSMLNAYSALSISGPRSPERRFSLDTEHRVSSVASDCSSEGS
MSCGSSDSYAGYNDQSYVSSPDPQLEENLKCQHMPPHSRLNAQPFLQNFHDPLTRVQSYS
LEEPKYHHKPPLPHLAVPLQHPAVGARSSCPGDYPSPPGAPRAKAPHLGLSLVATRVDSI
SDSRLXDSSPSRQRKPYSRQEGLGGWDRPGYGPDAYGYRQTYSLPDNPAQPCYEQCTFQS
LPEPQEPAWRLPYCAVPPDPPRYQDSREKVYINLCNIFPPDLVRIVMKRNPHVTDAQQLA
AAILVEKSQLGY
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcacccggggcatgacctcgaccaccttcatgtggacagcactgac
ccccgtgtaagtgcatctgtaccttggtcaatggtagaaaaaccaacaatggataaagtt
cattctgggaaggaagaaaaagaggtgtctgaagagaatgtgagctctggtgactctgaa
gaaagcaccaactccgataatgagtcagaaccggtgagcagcgccccagcagagccatgc
tcgctaaccaagacccacagacagctgtgtcggtctccctgcctggagcctcacatcctc
aaacgcagtgacgttttgcaagactttaaacccgaggagtcccaggcgacatccaaggag
gcgaggaagccccctgatgtggtgcgagaataccaaacgaaactggagtttgcactgaag
ttaggttactctgaagaacaggttcagctcgtgctgaacaaactcggtaccgacgcttta
atcaatgacattttgggggaacttgtcaaactcggaaacaaaagtgaggctgaacaaacg
gttagtacagtcaccagtctgatgcgggaaacgtcttccctggaatcccagcggtcggaa
tctccaatgcaagaggtggcagcagatgacggggagaacctgagaccgatagtcatcgac
ggcagcaacgtggcaatgagccatggaaacaaagaagtgttttcctgccgaggaataaaa
ttggcggtggattggtttttggaaagaggccacaaagatgttacagtcttcgttcctgct
tggagaaaggagcagtcccggcccgacgctctcattacagatcaagaaattctgcgtaaa
ctagagaaggagaaggtcctggtgttcacgccgtcccggcgcgtgcagggcagacgtgtg
gtgtgctatgacgacaggttcatcgtgaagctggcgttcgagtcggacgggataatcatg
tccaatgacaactacagggatttggcaaatgaaaagccagaatggaagaagttcatagag
gagcgattattaatgtactcattcgtcaatgacaagttcatgccccccgatgaccccctt
gggagacacggcccgagcctggacaattttctgaggaagaaacctattgttcctgagcac
aaaaagcagccttgtccatatgggaagaagtgtacctacggacacaagtgcaagtattat
caccccgaaaggggcagccagccccagcggtcagtggctgatgaacttcgtgccatgtcc
agaaacacagcagccaagacggccagtgaaggagggctggtgaaaagcaacagcgtcccc
tgcagcaccaaggccgacagcacttccgatgccaagcgaggtgctccaaagaggcagtcg
gacccaagcatcaggactcagggctaccaagacctagaggagaagcttcccaccaaaaac
aaactggagaccaggtccgtcccctccctggtgagcatcccggccgcttcgcccgcaaaa
ccccaaagcactacgtctctaagcaatggccttccatctggagttcacttcccacctcag
gatcaaagaccacagggacaatatcctccaatgatgatggcaaccaaaactcatggaacg
ccaatgccttatgaacagtatccaaaatgtgactcgcctgttgacgttgggtattactcc
atgttgaacgcatattcagctctgagcatctcaggcccgcgaagtcccgagaggcgcttc
tccttagacacagagcacagggtgagctcggtggcctctgactgcagcagtgaagggagc
atgagctgcgggagcagcgactcgtacgcggggtacaacgaccagtcctacgtcagctct
ccggacccccagctggaggagaacttgaagtgtcagcacatgccccctcacagccgcctt
aacgcccagccgttcctgcagaacttccacgaccccttaaccagagtgcagagttacagt
ctcgaagagccaaagtaccatcacaagccgcctctcccgcatctggcggtgcccctgcag
cacccggccgtgggcgcgcggtccagctgccccggcgactacccgtctccccccggcgcg
cctcgcgccaaggccccgcacctcgggctctccttggtggccacgagagtagacagcatc
tccgactctcggctgntagacagctctccctccaggcagcggaagccttactcgcggcag
gaagggctgggaggctgggacaggccgggttacgggccggacgcctacggctaccggcag
acctactcgctgccggataaccccgcgcagccgtgttacgagcagtgcaccttccagagc
ctccccgagccgcaggagccggcctggcggctcccgtactgcgccgtgccgccggacccc
ccgaggtaccaggacagccgagagaaggtttacatcaacctgtgcaacatcttcccgccc
gaccttgtgagaattgtcatgaaaaggaaccctcacgtgaccgacgcccagcagctggct
gcagccattttggtggagaaatcccagctgggttactga
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