Vicugna pacos (alpaca): 102536202
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Entry
102536202 CDS
T08098
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102536202 (PNN)
03015 mRNA surveillance pathway
102536202 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102536202 (PNN)
03041 Spliceosome [BR:
vpc03041
]
102536202 (PNN)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102536202 (PNN)
Spliceosome [BR:
vpc03041
]
Complex C
Other components
EJC/TREX
102536202 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
102536202
NCBI-ProteinID:
XP_006212791
UniProt:
A0A6I9IIE5
LinkDB
All DBs
Position
6
AA seq
747 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EAEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVENVEPSENE
TSKELEPEMEFEVEPDKECKSLSPAKESASALETENEPEEKEDKESESQPEPVAQLQSLP
QPQPQPQPQPQPQPQSQSQSQAQSQPQPQPQPVLQTQPQPQPVLQTQPLSQPETVPLAVL
QLAPQVTQEQGHLPPERKEFPIESVKLTEVTVEPVLTVHAESKTKTKTRSRSRGRARNKT
SKSRSRSSSSSSSSSSSSSSSSGSSSSSGSSSSRSSSSSSSSSSGSSSRDSSSSSTSSSE
SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSREAKGSKDKNSRSDRKRS
ISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttacaggagcagctagaaaaggccaaagagagcctaaag
aatgtggatgagaatattcgcaagctcaccgggcgggatccgaatgatgtgaggcccatc
caagccaggttgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggactcggagagaatcacgccaagaaagc
gacccagaggacgatgatgttaagaagccagctttgcagtcttcagtcgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggcacccttcagaaatttaaacaggaatcc
actgttgctactgaaaggcaaaagaggcgccaagaaattgaacagaaacttgaagtgcag
gcagaagaagaaaggaagcaggttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaagcagacagaactgcggcttttggagcagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaagatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaagtcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaagcggaagttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagtgatggatgtgctagagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagttgaaaatgtagaaccttcagaaaatgaa
actagcaaagaattagagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgcaaaagagagtgctagtgctctagaaacggaaaatgagcctgaggaa
aaagaagacaaagaatctgagtcccagcctgagcctgtggctcagcttcagtccctgcct
cagcctcagcctcagcctcagccccagcctcagccccagccccagtctcagtctcagtct
caggcccagtcccagccccagccccagccccagccagtactccagacccagccccagccc
cagccagtactccagacccagcctctctcccagcctgagactgtgccattagctgtttta
cagctggcacctcaggttactcaggagcaagggcatttaccacctgagaggaaggagttt
cctatagagtctgtaaaactcactgaggtgacagtagagccagtcttgacagtacatgca
gagagcaaaaccaaaaccaaaaccaggagcagaagtagaggtcgagctagaaataagacg
agcaagagtagaagtcgaagcagtagcagtagcagttccagtagcagttcatccagcagc
agcagtggcagcagttccagcagtggcagcagcagtagccgaagcagttccagcagcagc
tccagcagcagtggcagcagcagtagggacagtagcagcagcagcactagtagtagtgag
agcagaagtcggagtaggggccgggggcacaacagagacagaaagcacagaaggagcgtg
gatcggaagcggagggacacttcaggactagagagaagtcacaaatcttcaaaaggtggt
agtagtagagaagcgaaaggatcgaaggataagaattcccggtctgacagaaagaggtct
atatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatca
gacaggaaagacaaaaggcgttaa
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