KEGG   Vicugna pacos (alpaca): 102536202
Entry
102536202         CDS       T08098                                 
Symbol
PNN
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03013  Nucleocytoplasmic transport
vpc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102536202 (PNN)
   03015 mRNA surveillance pathway
    102536202 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102536202 (PNN)
   03041 Spliceosome [BR:vpc03041]
    102536202 (PNN)
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102536202 (PNN)
Spliceosome [BR:vpc03041]
 Complex C
  Other components
   EJC/TREX
    102536202 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 102536202
NCBI-ProteinID: XP_006212791
UniProt: A0A6I9IIE5
LinkDB
Position
6
AA seq 747 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EAEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVENVEPSENE
TSKELEPEMEFEVEPDKECKSLSPAKESASALETENEPEEKEDKESESQPEPVAQLQSLP
QPQPQPQPQPQPQPQSQSQSQAQSQPQPQPQPVLQTQPQPQPVLQTQPLSQPETVPLAVL
QLAPQVTQEQGHLPPERKEFPIESVKLTEVTVEPVLTVHAESKTKTKTRSRSRGRARNKT
SKSRSRSSSSSSSSSSSSSSSSGSSSSSGSSSSRSSSSSSSSSSGSSSRDSSSSSTSSSE
SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSREAKGSKDKNSRSDRKRS
ISESSRSGKRSSRSERDRKSDRKDKRR
NT seq 2244 nt   +upstreamnt  +downstreamnt
atggcggtcgcagtgagaactttacaggagcagctagaaaaggccaaagagagcctaaag
aatgtggatgagaatattcgcaagctcaccgggcgggatccgaatgatgtgaggcccatc
caagccaggttgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggactcggagagaatcacgccaagaaagc
gacccagaggacgatgatgttaagaagccagctttgcagtcttcagtcgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggcacccttcagaaatttaaacaggaatcc
actgttgctactgaaaggcaaaagaggcgccaagaaattgaacagaaacttgaagtgcag
gcagaagaagaaaggaagcaggttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaagcagacagaactgcggcttttggagcagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaagatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaagtcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaagcggaagttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagtgatggatgtgctagagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagttgaaaatgtagaaccttcagaaaatgaa
actagcaaagaattagagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgcaaaagagagtgctagtgctctagaaacggaaaatgagcctgaggaa
aaagaagacaaagaatctgagtcccagcctgagcctgtggctcagcttcagtccctgcct
cagcctcagcctcagcctcagccccagcctcagccccagccccagtctcagtctcagtct
caggcccagtcccagccccagccccagccccagccagtactccagacccagccccagccc
cagccagtactccagacccagcctctctcccagcctgagactgtgccattagctgtttta
cagctggcacctcaggttactcaggagcaagggcatttaccacctgagaggaaggagttt
cctatagagtctgtaaaactcactgaggtgacagtagagccagtcttgacagtacatgca
gagagcaaaaccaaaaccaaaaccaggagcagaagtagaggtcgagctagaaataagacg
agcaagagtagaagtcgaagcagtagcagtagcagttccagtagcagttcatccagcagc
agcagtggcagcagttccagcagtggcagcagcagtagccgaagcagttccagcagcagc
tccagcagcagtggcagcagcagtagggacagtagcagcagcagcactagtagtagtgag
agcagaagtcggagtaggggccgggggcacaacagagacagaaagcacagaaggagcgtg
gatcggaagcggagggacacttcaggactagagagaagtcacaaatcttcaaaaggtggt
agtagtagagaagcgaaaggatcgaaggataagaattcccggtctgacagaaagaggtct
atatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatca
gacaggaaagacaaaaggcgttaa

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