Vicugna pacos (alpaca): 102536282
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Entry
102536282 CDS
T08098
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102536282 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vpc04812
]
102536282 (SPAST)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
102536282 (SPAST)
Membrane trafficking [BR:
vpc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102536282 (SPAST)
Cytoskeleton proteins [BR:
vpc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
102536282 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
MIT
AAA_2
DUF4368
MAPEG
DUF2515
Motif
Other DBs
NCBI-GeneID:
102536282
NCBI-ProteinID:
XP_006197315
UniProt:
A0A6I9HYM4
LinkDB
All DBs
Position
15
AA seq
616 aa
AA seq
DB search
MNSPGGRGKKKGSGGPSSPVPPRPPPPCLAPSRPAPRPAPQPQSPHKRNLYYFSYPLFVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSGAAPAPASASPPPPLPGGEAERVRAFH
KQAFEYISVALRIDEDEKVGQKEQAVEWYKKGIEELEKGIAVVVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPGPATATHKSTPKTNRTNK
PSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgagggaagaagaaaggctccggcggccccagcagcccggtg
cctcccaggcctccgcccccttgcttggccccctcccgtcccgcccccaggccggcccct
cagccccagtcgccgcataagcggaacctgtactacttctcgtacccgctgttcgtaggc
ttcgcgctgctgcgtttggtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggccgccaagaggagctccggggctgcgccggcgccggcc
tcggcctcgcccccgccgccactgccgggcggggaggccgagcgcgtccgagccttccac
aagcaggccttcgagtatatctccgttgctctgcgcatcgatgaggacgagaaagtagga
caaaaggagcaagctgtggaatggtataagaaaggtattgaagaactagaaaaaggaata
gctgtcgtagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgaccaatttggttatggccaaggaccgtttacaactattagagaagctgcaacca
gttttgcaattttccaagtcacaaacggacgtctataatgacagtactaacttgacatgc
cgcaacggacatcttcagtcagaaagtggagctgttccaaaaagaaaagaccccttaaca
cacactagtaattcactgcctcgttcaaaaacagttatgaaaactggatccacaggtctt
tcaggccaccacagagcacctagttgcagtggtttatccatggtttctggagtgagacag
ggacctggtcctgcaactgccactcataagagtacaccaaaaacaaatagaacaaataaa
ccttctacccctacgactgctgctcgtaaaaagaaagacttgaagaattttaggaatgtg
gatagcaaccttgctaaccttataatgaatgaaatagtggacaatggaacagctgttaaa
tttgatgatatagctggtcaagagttggcaaaacaagcattgcaagaaattgttattctt
ccttctctgaggcctgagttgtttacagggcttagagctcctgctagaggactgttactc
tttggtccacctggaaatggaaaaacaatgctggctaaagcagtagctgcagaatctaat
gcaaccttctttaatataagtgctgcaagtttaacttcaaaatatgtgggagaaggagag
aaattggtgagagctctttttgctgtggctcgagaacttcaaccttctataatttttata
gatgaagttgatagccttttgtgtgaaagaagagaaggagaacatgatgctagtagacgt
ctaaaaactgaatttctaatagaatttgatggtgtacaatctgctggagatgacagagtg
cttgtaatgggtgcaactaacaggccacaggagcttgatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttgccaaatgaggagacacgactacttttattaaaaaac
ctattatgtaaacaaggaagcccattgacccaaaaagaactggcacaacttgctagaatg
actgatggatactcaggaagtgatctaacagctttggcaaaagatgcagcactgggtcct
atccgagaactgaaaccagaacaagtgaagaatatgtctgccagtgagatgagaaatatt
cgcttatcggacttcactgaatccttaaaaaagataaaacgcagtgtgagccctcaaacc
ttagaagcatacatacgttggaacaaggactttggagataccactgtttaa
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