Vicugna pacos (alpaca): 102536304
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Entry
102536304 CDS
T08098
Symbol
PSMC5
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03050
Proteasome
vpc05010
Alzheimer disease
vpc05012
Parkinson disease
vpc05014
Amyotrophic lateral sclerosis
vpc05016
Huntington disease
vpc05017
Spinocerebellar ataxia
vpc05020
Prion disease
vpc05022
Pathways of neurodegeneration - multiple diseases
vpc05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102536304 (PSMC5)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
102536304 (PSMC5)
09164 Neurodegenerative disease
05010 Alzheimer disease
102536304 (PSMC5)
05012 Parkinson disease
102536304 (PSMC5)
05014 Amyotrophic lateral sclerosis
102536304 (PSMC5)
05016 Huntington disease
102536304 (PSMC5)
05017 Spinocerebellar ataxia
102536304 (PSMC5)
05020 Prion disease
102536304 (PSMC5)
05022 Pathways of neurodegeneration - multiple diseases
102536304 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
vpc03051
]
102536304 (PSMC5)
Proteasome [BR:
vpc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
102536304 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
AAA_17
PhoH
FapA
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
bpMoxR
DUF5906
RNA_helicase
ABC_tran
Zeta_toxin
AAA_11
AAA_19
TsaE
HR1
Prominin
Motif
Other DBs
NCBI-GeneID:
102536304
NCBI-ProteinID:
XP_006199369
UniProt:
A0A6I9HY50
LinkDB
All DBs
Position
16
AA seq
406 aa
AA seq
DB search
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacggaccagagcagatggagctggaagaggggaaggcaggcagtggactc
cgccaatactatctgtccaagattgaagaactccagctgattgtgaacgataagagccaa
aatctccggaggctgcaggcacagaggaatgagcttaatgcaaaagttcgcctgctgcgg
gaagagctgcagctgttgcaggaacagggctcctatgtgggggaagtggtccgggccatg
gataagaagaaagtgttggttaaggtacatcccgagggcaagtttgtcgtagatgtggac
aagaacatcgacatcaatgacgtgacacccaattgccgggtagccctcagaaatgacagc
tacactctgcacaagatcctgcctaacaaggttgacccactagtgtcactgatgatggtg
gagaaggtgccagattcaacttatgagatgattggtgggctggacaagcagatcaaggag
atcaaagaagtgatcgagctacccgttaagcatcctgagctttttgaagcgctaggcatc
gcacagcccaagggagtgctgctgtacggacccccaggcactgggaagacgctgttagcc
cgggctgtggctcatcatacagactgtacctttattcgtgtctctggctctgaattggta
cagaaattcatcggggaaggggcaaggatggtgagggagctgtttgtcatggcccgagaa
cacgctccgtccattatcttcatggacgaaatcgactccatcggatcctcacggttggag
gggggctccggaggagacagtgaggtccagcgcacgatgctggagctgctcaaccagctg
gatggctttgaggccaccaagaatatcaaggtcatcatggccactaataggattgatatc
ctggactcagcactgcttcgcccagggcgcatcgacagaaaaattgaattccctccccct
aacgaagaggcccggctggacatcttgaagatccactctcggaaaatgaacctgacccgg
gggatcaacctgagaaaaattgcagagctcatgccgggagcgtcaggggctgaagtgaag
ggcgtgtgcactgaagccggcatgtacgctctgcgggaacggcgagtccatgtcacccag
gaggactttgagatggcagtagccaaggtcatgcagaaggacagtgagaaaaacatgtct
atcaagaagctgtggaagtga
DBGET
integrated database retrieval system
