Vicugna pacos (alpaca): 102536366
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Entry
102536366 CDS
T08098
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102536366 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102536366 (SMARCAD1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102536366 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
CUE
ERCC3_RAD25_C
TTC3_9th
HHH_3
Motif
Other DBs
NCBI-GeneID:
102536366
NCBI-ProteinID:
XP_015098789
UniProt:
A0A6J0AS74
LinkDB
All DBs
Position
2
AA seq
1026 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPETPENERKPSISYFKNQRGIQYIDLSSDSEDIVSPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTMAGRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEEDEYNDDQSIKKKRLDLESN
ESAESSSNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDMQY
ASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKIIELRP
FNSWEALFTKMSKTNGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNG
GGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY
QEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVI
VTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPV
QNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFIL
RRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQLRK
MANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHI
NNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRL
DGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAE
DRCHRVGQTKEVLVIKLISLGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLL
KTSMGL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaagaagtaagattgaggaagcg
cctgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatataact
gaaaaaacagaagattctagtgttccagaaactccagaaaatgaaagaaaaccaagtata
tcatatttcaagaatcaaagaggaatacagtatattgatttgtcttctgatagcgaagat
attgtttcccctaattgctccagtaccgttcaagagaagaaattcaacaaagacacagtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggcaggt
agaaataataatgatatttcagaactggaagacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaactttttccacagagaagtgacagtgatttacttaag
ttgattgaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccatatgag
gaagatgaatataatgatgaccaatctataaaaaagaagagactggatcttgaatcaaat
gagtctgcagaatctagcagtaattgggaaaagcaggaaagtattgtattgaaattgcaa
aaggaatttcccaattttgataaagaggaattaagggaggtactcaaggaacatgaatgg
atgtacacggaggctttagaatctttaaaagtgtttgcagaagaccaagatatgcaatat
gcttcacctagtgagtttccaaatggaaaagaagtttcttcaagaagtcaaaattatcct
aaaaatgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaatggtttt
aacaagaaacgtaaaaaaaatgtatttaatcctaaaagagttattgaagactctgagtat
gattcaggttctgatgtcggtagttcactggatgaggactatagtagtggtgaagaagtg
atggaggatggctataaaggtaaaattcttcacttccttcaagatgcttcaattggtgaa
cttactttgattcctcagtgctctcagaaaaaggctcagaagataatagaactccggccc
tttaatagttgggaagctctgttcacaaagatgtccaaaacaaatggcttatcggaagat
ttgatatggaactgtaaaacactgatccaagaaagggatgtagttataaggctgatgaac
aaatgtgaagatatttcaaataaattgacaaagcaagtcactatgctcactggaaatgga
ggtggatggaacatagaacaaccctctattctaaaccaaagtttgtcactcaagccctat
cagaaggttggtttgaattggctggcgttggtacataaacacggacttaatggcattttg
gcagatgaaatgggcctcggaaaaactattcaagccattgcattcctggcatacctgtat
caggagggtaataaaggtcctcatttgatcgttgttccagcatcaactatagataactgg
ttaagggaagttaatttatggtgccccactttaaaggtgctctgttactatggttctcaa
gaagaacgtaaacagattagatataacattcatagtaaatatgaagaatataatgtaatt
gtgaccacgtataattgtgcaatcagcagttctgatgaccgtagtctgtttcgtcggctg
aaacttaattatgcaatttttgatgaggggcatatgctgaagaacatgggctccatccgc
taccagcaccttatgacaattaatgcaaataaccgtttgctgctcacaggcacacctgtg
cagaataatctgttagaactcatgtcgctattgaattttgttatgccacacatgttcagt
agtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatctgcagatgagcaa
agtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccatttattctc
agaagagtaaaagaagaggttctcaagcaactaccccctaagaaagatcgaattgagctg
tgtgcaatgtcagagaagcaggagcaactctatttgggtcttttcaacagattgaaaaaa
tctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcaattgagaaaa
atggccaatcatcctttattacatcgccagtattacacagctgaaaaactcaaggaaatg
tctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatctttgaa
gatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcgacacatt
aataatttccaattagacatggacttgattttagattctggaaaatttcgagttttagga
tgcatcttgtctgaattgaaacagaagggtgatagagttgtattatttagccaatttacc
atgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctcagatta
gatggaaagactcagatatctgaaaggattcatctaattgacgagtttaacaccgatatg
gatatctttgtgtttctgctgtcgacaaaagctggtggcctaggaataaacctgacttca
gctaatgttgttatactgcacgatattgactgtaatccttacaatgacaaacaagcagaa
gatagatgccatagagtgggccagactaaagaagtactggttataaaattaataagccta
gggacgattgaagaatccatgctaaaaattaatcaacagaaattgaaactagaacaagac
atgaccacagtagatgaaggtgacgaagggagtatgccagcagatatagccacattacta
aaaacgtcaatgggcctgtga
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