Vicugna pacos (alpaca): 102536682
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Entry
102536682 CDS
T08098
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc02010
ABC transporters
vpc04976
Bile secretion
vpc05206
MicroRNAs in cancer
vpc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102536682 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
102536682 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102536682 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
102536682 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpc02000
]
102536682 (ABCB1)
04147 Exosome [BR:
vpc04147
]
102536682 (ABCB1)
04090 CD molecules [BR:
vpc04090
]
102536682 (ABCB1)
Enzymes [BR:
vpc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
102536682 (ABCB1)
Transporters [BR:
vpc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
102536682 (ABCB1)
Exosome [BR:
vpc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102536682 (ABCB1)
CD molecules [BR:
vpc04090
]
Proteins
102536682 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA
AAA_14
AAA_29
AAA_15
G-alpha
APS_kinase
AAA_7
AAA_30
DUF815
PRK
nSTAND1
nSTAND3
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
102536682
NCBI-ProteinID:
XP_015101231
UniProt:
A0A6J0ATN8
LinkDB
All DBs
Position
7
AA seq
1281 aa
AA seq
DB search
MDLEEDHNVRARKKNFLKRDKKSKKDEKKEKKPTVSTFAMFRYSNWLDRLYMVLGTTAAI
IHGAALPLMMLVFGDMTDSFANVGNFGNMTASNVTDGSYMNSTNFGSTLEKDMTTYAYYY
SGIGAGVLIAAYIQVSFWCLAAGRQIHRIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDD
VSKINEGIGDKVGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSS
FTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANIS
IGVAFLLIYASYALAFWYGTSLVLANEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANA
RGAAYEIFKIIDNKPSIDSYSNNGHKPDNIKGNLEFRNVHFSYPSRREVKILKGLSLQVQ
SGQTVALVGNSGCGKSTTVQLLQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQEPV
LFATTIAENIRYGRENVTMDEIKKAVKEANAYDFIMKLPNKFDTLVGERGAQLSGGQKQR
IAIARALVRNPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNADVI
AGFDDGVIVEQGNHYQLMKEKGIYFKLVTMQTRGNEIELENAADGSKSEMDALDRSPEDL
GSSLIRRKSTHKSIHGPQGQDRKLSTEEALDDSVPPVSFWRILKLNITEWPYFVVGIFCA
IINGGLQPAFSVIFSRIIGVFTRDEDPQTKQHNSNMFSLLFLILGIISFITFFLQGYTFG
KAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQ
NVANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVIEMKMLSGQALKDKKELEGAGKIAT
EAIENFRTVVSLTREEKFEYMYAQNLQVPYRNSLKKAQIFGITFSLTQAMMYFSYAGCFR
FGAYLVAHGLMDFQDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKISASHIIMIIEKVPLI
DSYSTEGLKPITMEGNVTFNEVKFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKST
VVQLLERFYDPLAGKVLIDGQEIKHLNVQWLRAHMGIVSQEPILFDCSIGENIAYGDNSR
VVSQEEIVRAAKEANIHPFIEGLPNKYNTRVGDKGTQLSGGQKQRIAIARALVRQPNVLL
LDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADVIVVIQNGRVMEHGTHQ
QLLAQKGIYHSMVSVQAGAKR
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaagaagaccacaatgtaagggcaaggaagaagaactttttgaaaagggac
aaaaaaagtaaaaaagatgaaaagaaagaaaagaaaccaactgtcagtacttttgcaatg
tttcgctattcgaattggctggatagattgtacatggtgctggggacaacggccgccatc
atccacggagctgcactccccctcatgatgctggtttttggagacatgacggatagcttt
gcaaatgtaggaaattttggaaacatgactgcttcaaacgtaactgatggaagttatatg
aacagtacaaattttggcagcactctggaaaaggatatgaccacgtacgcctactattac
agcggaatcggtgctggggtgctcattgccgcttacatccaggtttcattctggtgcctg
gcagctggaagacaaatacacagaattcgaaaacagttttttcatgctattatgcgacag
gagattggctggtttgatgtgcatgatgttggagagcttaacacccgactcacagatgat
gtctccaaaattaatgaaggcattggtgacaaagttggaatgttctttcagtcaatggca
acgttcttcactggttttatagtaggatttacccgtggttggaagttaacccttgtgatt
ttggccatcagtcctgttcttggtctgtcagcagctgtctgggcaaagatattgtcttca
tttactgataaagaactcttggcttacgcaaaagctggagcagtagctgaagaggtctta
gcggcaattagaactgtgattgcatttggaggacaaaagaaagaacttgaaaggtacaac
aaaaatttagaagaagctaaaagaattggaataaagaaagctattacagccaacatttct
ataggtgtcgccttcctgctgatctatgcatcctatgctctggcattctggtatgggacc
tccttggtcctcgcaaatgaatattctattggacaagtactcactgtcttcttttctgta
ttaattggggcttttagtgttggacaggcatctcccagcattgaagcatttgcaaacgca
agaggcgcggcttacgaaatcttcaagataattgataacaaaccaagcattgacagctat
tcgaataatgggcacaaaccagacaacattaagggaaatctggaattcagaaatgtgcac
ttcagttacccatctcgacgtgaagttaagatcttgaagggcctcagcttgcaggttcag
agtgggcagacagtggccctggttgggaacagcggctgtgggaaaagcaccacggtccag
ctgttgcagaggctctatgaccccacggagggcgtggtcagtattgatggacaggacatt
aggaccatcaatgtaaggtatctgcgggaaattatcggtgtggtgagtcaggaacctgtg
ttgtttgccacgacaatagctgagaacattcgctatggccgtgaaaatgtcaccatggat
gagattaagaaagccgtcaaggaagccaacgcctatgactttatcatgaaactgcctaat
aaatttgacaccctggttggagagagaggggcccagctgagcggtggacagaaacagaga
atcgccattgctcgggccctggttcgcaaccccaagatcctcctgctggacgaggccaca
tcggcgctggacactgagagtgaagcggtggttcaggtggctctggataaggccagagaa
ggtcggaccaccattgtgatagcacatcgtttgtccacagtccggaatgctgacgtcatc
gctggttttgatgatggagtcattgtggagcagggaaatcactaccagctaatgaaggag
aagggcatttacttcaaactcgtcacaatgcagacaagaggaaatgaaattgaattagaa
aatgcagctgatggatccaaaagtgaaatggatgccttggacaggtctccagaagatcta
ggatccagtctaataagaagaaaatcaactcacaagagtatccatggaccacaaggccaa
gacagaaagctcagtacagaagaggccttggatgacagtgtacctccagtttccttttgg
aggattctgaagctaaatataactgaatggccttattttgtggttggtatattttgtgcc
attataaatggaggcctgcaaccagcattttcagtaatattttcaaggattataggggtt
tttactagagacgaggatcctcagacgaaacaacacaacagtaacatgttttcgctattg
tttcttatccttggaattatctcttttattacatttttccttcagggctacacgtttggc
aaagccggagagatccttaccaagcggctccgatacatggttttcaggtccatgttgaga
caggatgtgagctggtttgatgaccctaaaaacaccacgggagcattgacgaccaggctt
gcaaatgacgccgctcaagttaaaggggctataggttccagacttgctgtaattacccag
aatgtcgcaaatcttgggacaggcattattatatccttaatctatggctggcaattaaca
cttttactcttagcaattgtgcccatcattgcaatagcaggagttattgaaatgaaaatg
ctgtctggacaagcactgaaagataaaaaagaactagaaggtgccgggaagattgcaacg
gaagcaatagaaaacttccgaacagttgtttccttgactcgagaggagaagtttgaatat
atgtatgcccagaatctgcaggtaccatacagaaactctctgaagaaggcgcaaatcttt
ggaatcacgttctccctcacccaggcaatgatgtatttctcttacgctggctgtttccgg
tttggcgcctacttggtggcgcatggcctcatggactttcaggatgttctgttggtgttc
tcagctatcgtctttggagctatggctgtagggcaggtcagttcatttgctcctgactac
gccaaagccaaaatttcagcatcccacatcatcatgatcattgaaaaagtccctctgatc
gacagctatagcacggaaggcctgaagccgattacaatggaaggaaatgtgacatttaat
gaagtcaagttcaactatcccacgcgaccagacatccctgtgctccagggactgagcctc
gaggtgaagaagggccagacactggccctggtgggcagcagcggctgtgggaagagcaca
gtggtccagctcctggagcggttctatgaccccttggctgggaaagtgctaattgacggc
caggaaataaagcatctgaatgtccagtggctccgggcacacatgggcatcgtgtcccag
gagcccatcctgttcgactgcagcatcggcgagaacattgcctatggagacaacagccgg
gtcgtgtcgcaggaggagatcgtgcgggcagccaaggaggccaacatacaccccttcatc
gaggggctgcctaataaatacaacaccagagtaggagacaaaggaactcagctctctggt
ggccagaaacagcgtattgcaatagctcgtgcccttgttagacagcctaatgttttgctt
ttggatgaagctacatcagctctggatacagaaagtgaaaaggttgtccaagaagccctg
gacaaagccagggaaggccgcacctgcatcgtgattgctcaccgcctgtccaccatccag
aatgcggatgtgatcgtggtgattcagaacggcagagtcatggagcatggcacgcatcag
cagctgctggcacagaaaggcatctatcattccatggtcagtgtccaggccggggcaaag
cgctag
DBGET
integrated database retrieval system
