Vicugna pacos (alpaca): 102536828
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Entry
102536828 CDS
T08098
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102536828 (RNF180)
Enzymes [BR:
vpc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102536828 (RNF180)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102536828 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Pyridox_oxase_2
zf-RING_6
REC104
Motif
Other DBs
NCBI-GeneID:
102536828
NCBI-ProteinID:
XP_015096208
UniProt:
A0A6J0AKH5
LinkDB
All DBs
Position
3
AA seq
450 aa
AA seq
DB search
MRPSLKYLSHPRVQSGCDKETLLTGGASKNRNHRLLNMAQSNNGPGRLTEALCLEAPSTY
FEMKNEKLLFKASDPKYQLFVPQLVTGRCTTRAFHRKSHSLDLNISEKLTLLPSLYGIRS
KTTAYSRLNETQPTDLSGLPLESSKNNCSFQISSSFDPNILLQRFSVAPRETQTQRGGEF
HCGLEASAVYSDHASSNSLTFLMDLPSAGRSMLEAPEQEEHLSPLDFLHSGSFSLGAINQ
RLSKKERSKLKNLRRKQRRHERWLQKQTLNNEMSTDDDNEYAEEKEGYICAVCLDVYFNP
YMCYPCHHIFCEPCLRTLAKDNPANTPCPLCRTIISRVFLQTELNNATKTFFTEEYLKIK
QSFQKSSSAKWPLPSCRKAFRLFGGFHRHAAPVTRRQFPHGAHRMDYLHFEDDSRGWWFD
MDMVIIYIYSVNWVIGFIVFCFLCYFFFPF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagaccatcgctgaaatacttgtcacatcctagagttcagtcaggttgtgacaaggaa
actctgctgacaggtggcgcctccaaaaacagaaatcacaggcttttaaacatggcccaa
agtaataatggtcctggaagattaacagaagcactctgcctagaggcaccatcaacgtat
tttgagatgaagaatgaaaaactgctgttcaaagcgtcagatccaaaataccagcttttt
gttccacagcttgtgactggcagatgcactacgagagcttttcatagaaaatcacatagt
ttggatctgaacatcagtgagaaactgactttattaccctccttatatggaatacgtagt
aagactactgcctattccaggctaaatgaaacacagcctactgacctttcaggcttgcct
ttagaatctagcaaaaataactgttcctttcaaatttcatccagttttgatcctaatatt
ctgctgcaaagattttcagtggctccccgtgagacccagacacaaagaggaggagaattt
cattgtggtctagaagcttctgcagtgtactctgaccatgctagttctaacagcctgact
ttcctgatggacctgccctcagctggcaggagcatgctggaggccccagagcaggaggag
cacctctctcctctggacttcctgcactcgggcagtttttctttgggtgccattaatcag
aggctcagtaagaaagaaaggagcaagctgaagaatctgaggcggaaacaacgaaggcat
gagagatggctgcagaagcagactttgaataatgagatgagcacagatgatgacaatgaa
tatgcagaggaaaaggaaggctacatctgtgcagtgtgtctggatgtttatttcaatccc
tacatgtgttacccttgccaccacatcttctgtgaaccctgcttacggactcttgccaaa
gacaatcctgcaaacactccctgcccattgtgtcggacaattatttccagagtctttctc
cagacagaactaaacaatgccacaaagacattctttactgaagaatatttgaaaataaaa
caaagctttcagaaatccagctctgcaaagtggccactaccaagctgcagaaaagcattc
cgtctttttggaggtttccacagacatgcagctccagttacaaggaggcagtttccacat
ggcgcacataggatggattatctgcactttgaggatgacagccgtggatggtggtttgac
atggatatggtgatcatctacatttattctgtgaactgggtcattggattcattgttttc
tgctttctttgctattttttctttccattttag
DBGET
integrated database retrieval system
