Vicugna pacos (alpaca): 102537173
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Entry
102537173 CDS
T08098
Symbol
ATG2B
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04136
Autophagy - other
vpc04140
Autophagy - animal
vpc05010
Alzheimer disease
vpc05014
Amyotrophic lateral sclerosis
vpc05016
Huntington disease
vpc05017
Spinocerebellar ataxia
vpc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102537173 (ATG2B)
04136 Autophagy - other
102537173 (ATG2B)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102537173 (ATG2B)
05014 Amyotrophic lateral sclerosis
102537173 (ATG2B)
05016 Huntington disease
102537173 (ATG2B)
05017 Spinocerebellar ataxia
102537173 (ATG2B)
05022 Pathways of neurodegeneration - multiple diseases
102537173 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102537173 (ATG2B)
03029 Mitochondrial biogenesis [BR:
vpc03029
]
102537173 (ATG2B)
Membrane trafficking [BR:
vpc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102537173 (ATG2B)
Mitochondrial biogenesis [BR:
vpc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102537173 (ATG2B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
102537173
NCBI-ProteinID:
XP_006213966
UniProt:
A0A6I9IJE7
LinkDB
All DBs
Position
6
AA seq
2078 aa
AA seq
DB search
MPWPFTESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLTQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLATGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGTQPFEGLEKFAETIETVLRRVKVTFIDTVLRVEHVPE
NSKTGTALEIRIERTMYCDEAADESSGINVHQPTAFAHKLLQLSGVSLFWDEFSASAKSS
PVCSTAPAETEPKLSPSWNPKIVYEPHPQLTRNLPEVAPSDPVQIGGLIGRLELSLTLKQ
NEVLPGAKLDIDGQIDSVHLFLSPRQVHLLLDMLAAIAGPENSSKIGLANKDRKSRPMQQ
EDEYRIQMELNRYYLRKDSLSAAVSSEQSFYETETARTPSSREEEVFFSMADMDMSHSLS
SLPPLGEPPNMDLELSLTSTYTNTPAGSPLSTTVLQPTWGDFIDHHKEQPVRGSALPSNL
VHPASLQKTSLPSRSVSVDESRPELIFRLAVGTFSVSVLHIDPLSPPETSLNLNPLTSMA
IAFFTCIEKIDPAGFSTEDFKSFRAVFAEACSHDHLRFIGTGIKVSYEQRQRSSSRYFST
DMSIGQMELLECLFPTDFHSVPPHYTELLMFHSKERTDSHPPVCLQLHYKHSENKGPQSN
QARLSSVPQKAELQIKLNPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYTSYNKHIS
LHKAFAEVFLDDSHNPANCRISVQVATPALNLSVRFPIPDLRSDQERGPWFKKSLQKEIL
HLAFTDLEFKTEFIGGSTPEQVKLELTFRELVGSFQEGKGEPSVKFFHVASGGDGDTTSS
DDFDWPRIVLKVNPPAMHSILERIAAEEEEESDGHYQEEEEGGAHSLKDVCDLRRPAPSP
FSSRRVMFENEQMVMPGDPVEMTEFQDKAISNSHYVLELTLPNIHITLPNKSFYEKLYNR
IFNDLLLWEPTAPSPVETFENISYGIGLSVASQLINTFSKDSFSPFKSTVHYDEESGSEE
ETLQYFSTVDHNYRSRRKKKLDSQNKNSQSFLSVLLSINHGLMAVFTDVKQDNGDLLENK
HGEFWLEFNSGSLFCVTKYEGFDDKHYICLHSSSFSLYHKGMVDGAILPTETRLPTSTRP
HWLEPTIYSSEEDGLSRAASDGVGGEALNMLSVAVKILSDKSESNTKEFLIAVGLKGATL
QHRMLPSGLSWHEQILYFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLYLPIRSLL
TVETFSVSSSVSLDKSSSTLRIILDEAALHLSDKCNTVTINLNRDYVRVMDMGLLELTIT
AVKSDSDGEQTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYIASYGDLQAAHKADMKPG
APQRKMKVDSSGRSSSRGPVLPEADQQILRDLMSDAMEEIDTQEAASSVKPQSNGVLDEK
SQIQEPCCSDLFLFPDESGNVSQEPGPTYASFTHHLISDAVTGAPTENDDFCILFAPRAT
IQEKEEEPVVKIMVDDAIVIRDNYFSLPGKKTDTSRAPLHFPIPVIRYVVKEVSLVWHLY
GGKDFGTAPPTSPAKSYISPHSSPSHTPTRHGRNMVCGGKGRNHDFLMEIQLSKVKFQHE
VYPPCRPECDSSLLEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNML
TVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELLMTPDPEV
KKSPGADVTCSLPRHLSTSKEPNLLVSFPGPKQPSLHDSANSVHMVNGEEEKDFSAEEAS
FSDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLFYRHG
LLGVDKLFSYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLSIEPKKIKRFPHH
RLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVV
KPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHSED
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccgtttacagagtccatcaagaagagggcctgtcggtacctcctgcagagg
tacctcggtcactttctgcaagagaagctgagcctggagcagctcagcctggacctgtac
cagggcaccgggtccctcacccaggtacccctggacaaatggtgtctcaatgagatcctg
gagtcagcagatgcgcctttagaagtcactgaaggattcatacagtcaatttctctgtca
gttccatggggctccttgctacaggataactgtgcactggaagtgaaagggttagaaatg
gtcttccgacctagacctcgcctagcaactggttctgagcctatgtattggtcaagtttc
atgaccagcagtatgcaattggcaaaggaatgtcttagccagaaactaacagatgagcaa
ggagaaggaacccagccttttgaaggacttgaaaagtttgctgaaaccattgaaacagta
ctaagaagagtaaaagtcacttttatagacactgttttgagagttgaacatgtgccagaa
aattccaaaactggaactgcacttgaaattcgaatagaaaggacaatgtactgcgatgaa
gctgccgacgagtcctcaggaatcaacgtgcatcagcccacagcgtttgctcacaagtta
ctgcagctctctggagtgtctctcttctgggatgagttttctgcatcagcaaaatcttcc
ccagtgtgttcaactgcaccagcggaaactgagccaaagctgtcacctagctggaatccc
aaaattgtttatgagccacacccacaactaactagaaatttgccggaggtagcaccctct
gacccagtgcagattggagggctaattggtaggttggagttgagtcttacattgaaacag
aatgaagtacttcctggagctaagttggatattgatgggcagatagactctgtacatctg
ttcctgtcgccaaggcaggtacacttgcttttggatatgttagcagctattgctggacca
gaaaattcaagcaaaatagggttagctaataaagacagaaaaagtcgacccatgcagcaa
gaagatgaatatcgaatccaaatggaattaaaccggtattatttgaggaaagattccctc
tctgccgctgtatcctcagagcaaagcttttatgagacagaaacggctcgtacaccttct
agccgggaagaagaagttttcttttccatggctgatatggacatgtcccatagtctgtct
tcccttccaccccttggggaacccccaaatatggacctcgagttatcattaactagtaca
tacaccaataccccagcaggatctccactaagcaccactgtgcttcagccaacttgggga
gatttcattgatcatcataaagaacagccagtaagagggtcagcattaccatccaaccta
gttcacccagcatctttacagaagacttctctcccgtctagatctgtgtcagtggatgaa
tccaggcctgaacttatttttagactagctgtgggaactttttcagtctctgtgcttcac
atcgatcctttatctccacctgaaacgtcactgaaccttaatccgttgacatctatggcg
atagctttctttacttgcatagaaaagattgatccagcaggattttcaacagaagatttt
aagtctttccgagcggtatttgcagaagcttgctcgcatgatcaccttagatttataggt
actggcatcaaagtgtcctatgaacaaaggcaaagatcatcttcccgctatttcagtact
gatatgtccattgggcagatggaacttttggagtgcctgtttccgactgattttcattct
gttcctcctcactatacagagcttttaatgttccattccaaagaacgaactgattcccac
cctcctgtgtgtcttcagcttcattataagcattctgagaataaaggaccccagagtaat
caagcaagacttagttctgttcctcagaaggcagaattacaaattaaattaaacccagta
ttttgtgagctggatatcagtattgtggacaggttaaattctttgcttcaaccccaaaaa
cttactacagtggagatgatggcatctcacatgtatacgtcatataataagcacattagt
ctgcataaagctttcgctgaagtatttctagatgattcacataatcctgcaaattgtcgg
atatcagtacaagttgccacaccagcattgaacctttctgttcgcttcccaatacctgat
cttcgatcagatcaagagagaggaccatggtttaagaaatcacttcagaaggagattctt
catttagcattcacagatctagaatttaagactgaattcataggaggatcaacccctgaa
caagttaaattggagcttacctttagagaactagtcgggtcattccaggaaggtaaagga
gaaccatctgttaagtttttccacgtggctagtggaggagatggagatacaacgtcgtca
gatgactttgactggccgcgaattgtactgaaagtaaacccaccagccatgcattccatt
ttggagagaatagcagctgaggaggaagaagaaagtgatggccactatcaggaggaagag
gagggaggcgctcattcgctgaaagatgtttgtgacctgagaagaccagccccgtctccc
ttttcttctcgtagagtaatgttcgaaaatgaacagatggtgatgccaggagaccctgta
gaaatgacagagtttcaggataaagcaatcagcaattctcactatgtgctggaacttacg
ttacctaatattcatataacactacctaataaaagcttttatgagaagctttataatagg
atctttaatgatttgctgctttgggaaccaacagctccttcaccagtagagacatttgaa
aatatctcatacggtattgggctttcagtagccagtcagctgattaataccttcagcaaa
gatagttttagtccatttaaatctacagttcactatgatgaggagagtggatctgaggag
gagactctgcagtatttttctactgttgatcacaattatcgttcccgtaggaaaaaaaaa
ctagactctcagaacaagaactcacagagttttctctcggtccttctgagtattaatcat
ggattgatggcagtgtttacagatgtaaagcaggataatggagatctgttggaaaacaaa
catggtgaattctggttagaattcaatagtggttcgttattttgcgtgacaaaatatgaa
ggttttgatgacaagcactacatctgccttcattctagcagcttcagtctctaccacaaa
ggcatggtggatggagcaattcttcctacagaaacacgactacccacttcaacccgccca
cattggctggaacctactatttattcctctgaagaagatggcctcagtagagctgcttca
gatggtgttggaggagaggctttgaatatgctctctgttgcagttaaaatattgtctgat
aaatcagagtccaatacaaaggaatttctcattgctgtaggactgaaaggagccactctc
cagcatagaatgcttccttctgggcttagctggcatgagcagattttatacttcttgaat
attgctgatgaacctgttctgggatacaatcctccaacttcatttacaaccttccatgtt
catctctggagctgtgcacttgattataggcctctttatttgccaattcgctctcttctt
actgtggaaacattcagtgtttcaagtagtgtttccttggataaatcatcatctactctc
agaataatcttggatgaagctgctttacacctgtctgacaagtgtaatactgtcactata
aatttgaatagagattatgttcgtgtgatggatatggggcttttggaattaacaataact
gcagtgaagtctgattctgatggagagcaaactgagccgcgctttgaattacactgttcg
agtgacgttgtccatatcagaacgtgctcggactcttgtgctgcgttaatgaatctcatt
cagtacattgcaagctatggggacttacaggcagctcacaaagcagacatgaagcctgga
gcccctcaaagaaagatgaaggtagattccagtggtcgatcatcctcacgtggcccagtt
cttcctgaagcagatcaacagattttacgagatttgatgagtgacgctatggaggaaatt
gacacacaggaggccgcttcgtcggtaaagccacagtctaacggtgttttggatgaaaaa
tctcaaattcaggagccatgttgttcagacctcttcctgtttccagatgagagtgggaac
gtgtcccaggagcctggccccacttatgcctcattcacacaccacctgataagtgatgca
gtgacaggcgcgcccacagagaatgacgacttttgtattctttttgcaccaagagcaacg
attcaggagaaggaagaggagccagttgtaaaaataatggttgatgatgcaattgtgata
agagataattactttagcctgcctggtaagaagacagatacgagcagagcgcccttacac
tttcccattcctgtaattcgttatgtggttaaagaagtctctcttgtttggcacctttat
ggaggaaaagattttggaacagcccctcctacttctccagctaaaagttatattagtccc
cacagctcaccttctcacacacccacaagacatggacgtaatatggtatgtgggggaaaa
ggaagaaaccatgactttttgatggagatacagttaagcaaggtgaagtttcagcacgag
gtctacccgccctgcagaccagaatgcgactccagcctcctggaacacccggtctcccgg
caggtgttcatcgtgcaggatcttgaaattcgagatcgtctggcaacatcacaaatgaat
aagtttttgtacttgtattgcagtaaagaaatgcctcgaaaagctcattccaacatgttg
acagttaaagcattacacgtgcgccccgagtctggcaggtcaccacaagaatgctgcctc
agagtgtcactgatgccacttcgcctcaatattgaccaggatgccttgttcttcctgaag
gattttttcacaagtctttctacagaagtagagcttctcatgactccagatccagaagtt
aaaaagtctcctggagctgatgtcacctgcagtttgccaaggcatttaagcacctcaaag
gagccaaatctacttgtttctttccctgggccaaagcagccctccctacacgacagtgcc
aactccgtgcacatggttaacggggaagaagagaaggacttctcagctgaagaagcgtcg
ttcagtgatcagcctgtgtttttcagagaatttagattcacatcagaagttcctattcga
cttgattatcacggcaaacacgtatcgatggatcagggtacgttagctgggattttgatt
ggtctggcccagttaaactgctctgaactgaagctgaagaggcttttctatcggcatggt
ttgctaggtgttgacaaattattctcatatgcaatcaccgaatggcttactgacatcaag
aagaaccagctgccgggaatcctggggggtgttgggcctatgcattcactagtacagctg
gtgcaaggcctcaaggacttggtctggttaccgatcgagcagtaccggaaggatggtcgc
atcgtcagaggatttcagagaggcgctgcctcctttggcacctcgacagcgatggctgct
ctagaactcacaaacaggatggtgcagaccatacaggcagcggcagagactgcttatgac
atggtgtctcctggtaccctttctattgagcccaagaagatcaagaggttccctcatcac
cggttagcccaccagccagtggacctgagggaaggcgtggccaaggcctacagtgtggtg
aaggagggaattacagacactgctcagaccatttatgagaccgcagctcgggaacacgag
agcagaggggtcaccggcgccgtgggcgaggtcctgcgccagattcccccggccgtggtg
aagccgctgatcgttgccacagaagcaacatcaaacgtcttgggcggcatgaggaaccag
attagaccagacgttcggcaagacgaatcccagaagtggcgccacagtgaagactga
DBGET
integrated database retrieval system
