Vicugna pacos (alpaca): 102537439
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Entry
102537439 CDS
T08098
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8
KO
K16499
protocadherin delta 2
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102537439
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Protocadherins
102537439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
102537439
NCBI-ProteinID:
XP_031540568
UniProt:
A0A6J3B4A8
LinkDB
All DBs
Position
14
AA seq
753 aa
AA seq
DB search
MSPARRGGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLIRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDINDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGSNGLQSVQAGAISLV
PEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIA
EYNLTLVAEDRGAPPLRTVRPYTVRVSDENDNAPLFTRPVYEVSVRENNPPGAYLATVAA
RDPDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQA
SDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVPGRTARDTAVARVQARDA
DEGANGELAFDLLQQEPREAFGIGRRTGEIVLTGDLSQEPPGRVFRALLVISDGGRPPLS
TTATVSFVVTAGGGRGLVSPASAGNPERSRPPGSRLAASGPALQWDTPLIVIIVLAGSXX
XXXXXXXXXXXXXXXXXXXPYGASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSGKDSG
KGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCGGGPSTHAS
THPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYDRTVTLLSPPR
PGRLPDLQEIGVPLYQSPPGRYLSPKKEANENV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagcgaggcgcgggggcagcccctgccttttccccttgcagcttttcagcctc
tgctgggtgctgtcagtggcccagagcaagacagtgcgatacagcaccttcgaggaggat
gcccccggcacggtcatcgggaccctggctgaagacctgcatatgaaagtgtccggagac
acaagcttccgcctgatgaagcagttcaacagctcgctgattcgggtgcgcgagggcgac
gggcagctgaccgtcggagacgcgggcctggaccgcgagcggctgtgcggccaggcccca
cagtgcgtgttggccttcgacgtggtcagcttctcgcaggagcagttccggctggtgcac
gtggaggtggaggtgagggacatcaacgaccacgcgccgcgctttccccgggcccagatc
cccgtggaggtgtcggagggtgctgccgtgggcacgcgcatcccactggaggtgccggtg
gacgaggacgtgggctccaacgggctgcagagcgtgcaagctggcgccatctcactggtg
ccagagggggcggcgcgcgagagcctggtggcgctggtcagcacctcggacagggactcg
ggcgccaacgggcaggtgcgctgcgccctctatgggcacgagcacttccggctgcagccg
gcctacgccggcagctacctggtggtgactgctgcgtccctggaccgcgagcgcatcgcc
gagtacaacctgacgctggtggccgaggaccgcggcgcgcccccactacgcactgtgcgg
ccctacaccgtgcgcgtgagcgacgagaacgacaacgcgccgctcttcacgcggccggtc
tatgaggtatcagtccgtgagaacaacccgccaggagcctatttggccacggtggccgcc
agggacccagacctaggccgcaacggccaggtcacctacaggctgctggaggccgaggtg
ggccgcgctgggggggccgtgtccacctatgtctccgtggacccggctacgggggccatc
tacgcactgcgcagctttgactatgaaactcttcgccagctcgacgtgcgcatccaggcg
agcgacggcggctcccctcagctctccagcagtgctctggtgcaagtacgggtgctggac
cagaacgaccacgcaccggtcctcgtgcacccagcaccggcgaacggctccctggaagtg
gcggtccctgggcgcaccgcaagggacacggccgtggcgcgcgtgcaggcccgggacgcg
gacgagggcgccaatggggagctggcgttcgacctgctgcagcaggagccgcgagaagcc
ttcggcatcggccgccgcacgggggagatcgtgctcaccggtgacctttcccaggagccg
cccggccgcgtgttccgggcgttgctggtcatatccgacggcggccgccccccgctctcc
actaccgccactgtcagcttcgtggtgacagcaggcggcgggcgcggcctggtgtcgccg
gccagtgcagggaacccagagcgctctcgcccgcccggctcgcggctcgcggcgtcggga
ccagcattacaatgggacacgccgctgatcgtcatcatcgtgctggccgggagctnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagccc
tacggtgcctctcctggcttcggaaaggagccggcgcccccagtggcggtctggaaagga
cattctttcaacaccatctccggccgagaagctgagaagttcagcggcaaagacagcggc
aaaggggacagtgatttcaacgacagcgattccgacatcagcggggacgctctgaagaag
gatctcatcaaccacatgcagagtggactgtgggcgtgcaccgcggagtgtaagatcctg
ggccattctgaccgctgctggagcccttcctgcggtggagggcccagcacacacgcctcc
actcacccaccagcccagatgtcaaccttctgtaagagcacatccctgccccgggatccc
ctgcgcagggacaattactaccaggcccagctacccaagacagtggggctgcagagtgtc
tatgagaaagtgctacacagagactatgacaggacagtcactctgctctcccctcctcgt
ccagggaggctcccagacttgcaggagatcggggtacccctctatcagtctcctcctggc
aggtacctgtccccaaagaaggaagccaatgaaaatgtgtaa
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