Vicugna pacos (alpaca): 102537446
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Entry
102537446 CDS
T08098
Symbol
CCDC88B
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 88B
KO
K25813
coiled-coil domain-containing protein 88B
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vpc04812
]
102537446 (CCDC88B)
Cytoskeleton proteins [BR:
vpc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
102537446 (CCDC88B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
Motif
Other DBs
NCBI-GeneID:
102537446
NCBI-ProteinID:
XP_006216797
UniProt:
A0A6I9IM77
LinkDB
All DBs
Position
25
AA seq
1433 aa
AA seq
DB search
MDGSKGPRIRDFLSGSLATWALGLAGLVGEVEEPEGEEEEEGEGLLCLEKRFLRLSDGAL
LLRVLGIIAPRSRGGLRMLRGHDGPAAWRVWNMNHLWGRLRDFYQEELQLLILSPPPDLQ
TLGFDPFSEEAVEELEGILRLLLGASVQCEHRELFIRHIQGLSLEVQSELAAAIQEVTQP
GVGVVLALAGPEPGELAPPELETLSRSLMGMLLRLARERDVGAQRLAELLLERETAPLLP
ETPARTPPEGPSHHLALQLANAKAQLRRLRQELEEKAELMLDSQAEVQGLEAEIRRLRQE
AQALSGQAKRAELYREEAEALRERAGPASHRWFSLLPNQEERVLSGTLEASKALLEEQLE
AAQERCARLHETQRENLLLRTRLGETQAELDSLRHQVDQLTEENVELELELQRSLEPPPG
SPGEASLPGVAPSLHDEVREAEAGRLRTLERENQELRGLLQVLQGQPGGQHPLLEEQSND
SVVPEPDSAPQTCLATDHGPQGFVGQAADEGLQTLDLAPLASDSDSQVVERPPQTAAIVP
VDLMLQKSDPAIEAQDFPKRVGHGACLQTPVSVALPQGPEIKIQAQLSLGVETGESVPKA
PELRQEGPGSKPGLSQLEEQETSGQKVDLLNGQTEAREHEQKLEGVVGDSVQQKPQQKLE
GAHEAQAWEGPIPGESLASVVPEQDALRLEVAQLRRETEALRAELEAQARRLEARGTEAT
RLSEELAQAQRAEAEAHQEVEAQTGELARLREALEAAGRELEAASREREALAEALAATGR
ERRLWEREGPRLRARAEAAEERLQVLESESCQHLEEAERERRERQVLQEELEKAVVRSQE
LGARLERLQNELEQAALEREEFLREQEFQQQRYQGLEQRLEAELQAAATSKEEALTALKR
RAQQLEEELFQLRQGPAGLEPEEQAEPRVTEAQSMRLIEVERSNATLTAEKAALQGQLQH
LEGQLGSLQGRAQELLLQTQRAQEHSSRLQAEKSILEMQGQELHRKLGVLEEEVRVARHS
QEETRGQQQALLRDHEALAQLQRRQEAELEGLLARHRDLKTNMRALELAHRELQGRHEQL
QVQRANVEAQEVALLAERERLMQDGHRQRGLEEELRRLQSEHDRAQMLLAEVSRERGELQ
GERGELRSRLARLELERAQLEAQSQRLRESNQQLDLSACRLTTQCELLTELRSAQEEENR
QLLAEVQALSRENRELLERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLE
PGPLPRTKKGSWLADKVKRLMRPRREGGPHGGPRLGADGAGSTESLGGPPETELSEGREA
DGTGSPSPAPMRRAQSSLCLQDETLAGGQRRKLSSRFPVGRSSESFSPGDTPRQRFRQRR
PGPLGAPSSHSKGSGVEWDGSVKTLVEHEADANREGLEVQEPEKRPLAPSLSQ
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggatgggagcaaggggcccaggatcagagacttcctgagtgggagcctggccacctgg
gcgctgggactggccggactggtgggggaggtggaggagccggagggggaagaggaggag
gaaggagaggggctgctttgtctggagaagaggttcttgcgtctcagcgatggggccctg
ctcctccgggtgctgggcatcattgcccccaggtctcgagggggcctgagaatgcttagg
ggccatgatggtcctgcagcctggcgggtgtggaacatgaaccacctgtggggacgactg
agggacttctaccaggaggagctgcagctgctgatcctgtcgccaccaccagacctccag
accctggggtttgaccccttctcagaggaggcggtggaggagctggaaggcattcttagg
ctattgctgggggcatcagtgcagtgtgagcaccgggaactgttcatccgacacatccag
ggcctcagcctggaggtccagagtgagttggctgctgccatccaggaggtgacccagcct
ggggtgggcgttgtgctggcgctggctgggcctgagcctggggagctggcacctccggag
ctggagacgctgtcccggagcctgatgggcatgctgttgaggctggcgagggagcgtgat
gtgggggcccagcggctggctgaactgctgctggagcgcgagacggcccccttgttgcca
gagactcctgctaggactcctccagagggcccctcacaccacctggccctgcaactggcc
aacgccaaggcccagctgcggcgcctgcgacaggagctggaggagaaagccgagctgatg
ctagattcccaggcggaggtgcagggcttggaggccgaaattcgaaggctccgccaggag
gcccaggcgctgtcgggacaggccaagcgagccgagctgtacagggaagaggcagaggcg
ttgcgggagcgggccggcccagcatcacatcgctggttctctctgctccccaaccaggag
gagcgggtgctctccggcactctggaagcctctaaagcactgctggaggagcagctggag
gctgctcaagagcgttgtgctcggctgcatgagacccagagggagaacctgctgctgcgg
acccggctgggtgagacccaagcggagctggactctctgcggcatcaggtggaccagctg
acagaggagaatgtggagctggagttggagcttcagcggagcctggagccacccccaggc
tctcctggggaggcatccctgccaggagtggccccctctctgcatgatgaagtgagggag
gcagaggctgggcggctgcgaaccctggagcgggagaatcaggagcttcggggcctgcta
caggtgctgcaggggcagccaggtggccagcaccccctgctggaggagcagagcaacgac
tccgtggttccagagccagattcagctcctcagacttgcctggccacagaccatggcccc
cagggctttgttggtcaggcagcggatgaaggcctccagaccttggacctggctcccctg
gcatctgattcagactcacaggtggtggagaggcccccacagacggctgccatcgttcct
gtagacctgatgctccagaagtcagaccctgccatagaggcacaggacttcccgaagagg
gttggccatggagcctgtctccagacccctgtctctgtggctctacctcagggtccagag
atcaaaattcaggctcagctgtcgctgggagtagagactggggagtcggtgcccaaggcc
ccagagctgagacaggagggccccgggagcaagcctggactctcgcagttggaggagcag
gagacctcaggccagaaggtggacctactcaatgggcaaacagaagccagagagcatgaa
cagaagctggagggggtggtcggggactcagtccagcaaaaaccacagcagaagctggaa
ggggctcatgaggcccaggcctgggaggggccgatcccaggggagagcctggccagtgtt
gtcccagagcaggatgccctcaggttggaggtggcgcagttgaggagagagactgaggcc
cttcgagctgagctggaggcccaggcccggagactggaggcccgaggcaccgaggctacc
cgcctctccgaggagctggctcaggcacagagggcagaggccgaggcccaccaggaggta
gaggcccagaccggagagctggcccggctgcgggaggccttggaggcagctggccgggag
ctggaggccgcatcacgggagcgagaggcactggcggaggcgctggcagcaacgggccgc
gagcgaaggctatgggagcgagaggggcccagactacgggcccgggctgaggcagctgag
gaacggctacaagtgctggagagcgagagctgccagcacctggaggaggccgagagggag
cgccgggagaggcaggtcctccaggaggagctagagaaggccgtggtgcggagccaggag
ctgggggcccggctggagcgtctgcagaatgagctggaacaggcggctctggagcgtgag
gaatttctgcgggaacaagagttccagcagcagaggtaccagggcctggagcagcggttg
gaagctgagctgcaggcagcagccactagcaaggaggaggcactgacggcgctcaaaagg
agggcccagcagctggaggaggaactgttccagctgcgccagggccctgcggggctggag
cccgaggagcaggctgagcccagggtcacagaggcccagagcatgcggctcattgaggtg
gagcgcagtaatgccacgctgacagccgagaaggcggctctgcaggggcagctgcagcac
ctggagggacagctgggaagcctgcaggggcgcgcccaggagctgctgctgcagactcag
cgggcacaggagcacagcagccgcctgcaggctgagaagtctatactggagatgcagggc
caggagctgcacagaaagctaggggtgctggaagaggaggtacgggtggcgaggcactcc
caggaggagacccgtgggcagcagcaggccctgcttcgggaccatgaggccctggcacag
ctacagcggcggcaggaggctgagctagagggactgctggcccggcaccgtgacctcaag
accaacatgcgggcactggagctggcccaccgggagctgcagggccggcatgagcagctg
caggtccagagggccaacgtggaggcgcaggaggtggccctactggcggagcgcgaacgc
ctgatgcaggatggacatcggcaacggggcttggaggaggaactgcggaggctgcagagt
gagcatgacagagctcagatgttgctggcggaggtttcaagggagcgaggggagctgcag
ggcgaacgcggggagctgcggagccggctggcacggctggagctggagcgggcacagctg
gaggcgcagagccagcgactgcgcgagtccaaccagcagctggacctgagcgcctgccgg
ctgaccacccagtgtgagctgttgacagagctccggagcgcccaggaagaggaaaaccgg
cagctgctggctgaggtacaggcgctgagccgggagaaccgggagctcctggagcgcagc
ctggagagccgggaccacctgcaccgcgagcagcgcgagtacctagaccagctcaacgcc
ctgcgccgagagaaacagaagctggtggagaagattatggaccagtaccgtgtgctggag
cctgggcccctgccccggacaaagaagggtagctggctggcagacaaggtgaagaggctg
atgcggccccggcgggaggggggcccccatggggggccgcgcctgggggccgatggggct
ggcagcaccgagagcctggggggccccccagagacggaactctccgagggcagggaggcg
gatgggacagggtccccttcaccggcacccatgcgccgggcccagagctccctctgcctg
caggatgagactctggcaggtgggcagcggcggaaactcagctcaagattccctgtgggg
cgaagctctgagtcattcagccctggggacaccccccggcagcgattccgacagcggcgt
ccaggcccgctgggggcacccagctcccacagcaaaggatctggcgtggaatgggatggc
tctgtcaagaccctggtggaacacgaagcagatgccaaccgagagggcctcgaggtgcag
gaaccggagaaacgtcctctcgccccttccctcagccagtga
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