KEGG   Vicugna pacos (alpaca): 102537774
Entry
102537774         CDS       T08098                                 
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102537774 (EXOSC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102537774 (EXOSC6)
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102537774 (EXOSC6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 102537774
NCBI-ProteinID: XP_031536679
UniProt: A0A6J3AS61
LinkDB
Position
9
AA seq 272 aa
MPGDHRRIRGPEESQPPQLYAADEDEAPVARDSTRLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRQVXXXXXXXXXAGAGGEAPAALRGRLLCDFRRAPFSGRRRRAPPGGGEER
ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAASLALADAGIEMYDLV
VGCGLSRAPGPAPIWLLDPTLLEEERAAASLTVALMPVLNQVAGLLGSGEGGPTESWAEA
VRLGLEGCQRLYPVLQQCLVRAARRRGTAAPP
NT seq 819 nt   +upstreamnt  +downstreamnt
atgcctggggaccaccgccgcatccgcgggcctgaagagtcgcagccgcctcagctgtac
gcggctgacgaagacgaggcgccagtcgctcgcgactcgacacggctgcgtcccgtgtac
gcgcgtgcggggctgctgagccaggcgaagggctccgcctacctggaggcgggaggcacc
aaggttctgtgcgccgtgtctggcccgcgccaggtnnnnnnnnnnnnnnnnnnnnnnnnn
nnggccggagcgggcggtgaggccccggccgcgttgcgcggccggctgctttgcgacttc
cgccgtgctcccttctcgggccgtcggcgccgggctcccccaggcggcggcgaagagcgc
gagctggcactggcgctgcaagaggcactggagccggcggtgcgcctgggccgctaccca
cgcgcacagctcgaggtgtccgcactactgctagaagatggcggctctgcgctggctgct
gcgctcactgccgcctcgctcgccctggccgatgcgggcatcgagatgtacgatctggta
gtgggctgcggcctaagccgcgcgccggggcctgcgcctatctggctgctggaccccacg
ctgctcgaggaggaacgcgccgccgccagcctcactgtggcgctcatgcccgtcctcaac
caggtggccgggctgctgggcagcggggagggtggccctaccgaaagctgggcggaggcc
gtgcgcctgggtctcgagggctgccagcgcctctaccccgttctgcagcagtgcttggtg
cgggccgcccgccgaaggggcaccgccgcgccgccctga

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