Vicugna pacos (alpaca): 102537873
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Entry
102537873 CDS
T08098
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102537873 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vpc04990
]
102537873 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
vpc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102537873 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
DUF3854
Motif
Other DBs
NCBI-GeneID:
102537873
NCBI-ProteinID:
XP_006217446
UniProt:
A0A6J0B307
LinkDB
All DBs
Position
11
AA seq
716 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTAPPPIQSPLPVIPHQKDPALDMNSSLAAP
SPSPEARAGLGTPGTPGTPELRQTFSSSFSQTSVFSSHTEASDPGPPRGSPGNKTSLEGA
LDKLSLKTPLGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLLGGSLPIKDL
TVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRR
SSTPIEHAPVCTSQAATPLTASAQPPAAASPSTASPPLATAAAHAATASVTAPASSRADS
PRPQASPASAAHTYSEAPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSLGANYSPTPYT
PSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPSYNPAPYSGGSAESASRPPWVTD
DSFSQKFAPGKSTTSVSKQTLPRGAPAYNPPPPGPHVSPLARGTVQRAERFPASSRTPLC
GHCNNVIRGPFLVAMGRSWHPEEFNCAYCKSSLADVCFVEEQNNVYCERCYEQFFAPVCA
KCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHG
CDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgaccctgacggggcctgggccctggggcttccgtctgcaggggggc
aaggacttcaatatgccgctcaccatctcccggatcacgccgggcagcaaggccgcccag
tcccagctcagccagggtgacctcgtggtggccattgacggcgtcaacacggataccatg
acccacctggaggcccagaacaagatcaagtctgccagctacaacctgagtctcacactg
caaaagtcgaagcgtcccattcccatctctacggctccgcccccgatccagtcccctctg
ccggtgatcccccaccagaaggacccagctctggacatgaacagcagcctggcagcaccc
agccccagccctgaggcgagggctggcctgggcaccccaggcacgccgggcaccccggag
ctcagacagacctttagctcctccttctcccagacctctgtcttctcctcacacacggag
gcctctgaccccggccctccacggggcagcccagggaacaagaccagcctggagggggct
ctggacaaactcagcctgaaaaccccgctgggctcaagtcagccaaggcagtataacaac
cccattggcctgtactcggcagagaccctgagggagatggctcagatgtatcagatgagc
ctccgagggaaggcctcaggtgccggactcctaggagggagccttcctattaaagacctg
acggtagacagcgcctctcctgtgtatcaggctgtgattaagaaccagaacaagccggaa
gacgaggctgatgagtgggcccgccgctcctccaacctgcagtcacgctccttccgcatc
ctggcccagatgactgggacggaatacatgcaagaccctgatgaagaagctttgcgaagg
tcaagcacccctattgagcatgctccagtgtgcaccagccaggccgccaccccgctgacc
gcttctgcccagccgcctgctgctgcctctcccagcacagcctcgccacccctggccaca
gccgctgcccatgctgccaccgcctctgtcacagcccctgcctcaagccgtgcggacagt
ccaaggccccaggcttctccagcgtctgctgcccatacgtacagtgaggccccagctgcc
cctgcacccaagccccgggttgtcactactgccagcatccggccttctgtctaccagcca
gtgcctgcatctacctacagcccatctctgggggccaattacagtccaaccccctacacc
ccttcccctgcccctgcctacaccccctcccctgcccccacctacaccccctcccctgca
cccacctactctccctccccagcaccagcctataccccctcgccagccccaagctataac
cctgcaccctacagtgggggctctgcggagtccgccagccgccccccatgggtgacagac
gacagcttctctcagaagttcgcccctggcaagagcaccacctccgtcagcaaacagacc
ctgccccgaggggcgcctgcctacaacccaccgccgccgggtccccatgtatcccccctt
gccaggggtaccgtccagagggccgaacgcttcccagccagcagccggaccccactctgt
ggccactgcaacaacgtcatccggggccccttcctggtagccatgggccgctcctggcac
cctgaagagttcaactgtgcctactgcaagagctccctggcagacgtgtgcttcgtggag
gagcagaacaacgtttactgcgagcggtgttacgagcagttctttgccccggtctgtgcc
aagtgcaacaccaagatcatgggggaagtgatgcacgccttgagacagacgtggcacacc
acctgctttgtctgcgcagcctgcaagaagcccttcgggaacagcctcttccacatggaa
gatggggagccctactgtgagaaagactacgtcaatctgttcagcaccaagtgtcacggc
tgtgatttccctgtggaggccggtgacaagtttatcgaagccctggggcatacctggcat
gacacctgcttcatttgcgcagtctgccacgtgaatctggaggggcagccattctactcc
aagaaggacaaacccctgtgcaagaagcacgcgcacgccatcaacgtgtag
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