Vicugna pacos (alpaca): 102538095
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Entry
102538095 CDS
T08098
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102538095 (LRBA)
Membrane trafficking [BR:
vpc04131
]
Endosome - Lysosome transport
Others
Others
102538095 (LRBA)
Endosome - Golgi transport
102538095 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102538095 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR55
KNTC1_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
102538095
NCBI-ProteinID:
XP_031540142
UniProt:
A0A6J3B453
LinkDB
All DBs
Position
2
AA seq
3079 aa
AA seq
DB search
MASEDNNVPSPPPTGDDGGGGGKEETPVEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDVTCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSEEVDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFSKYLSNLHNGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFIG
TVNIYNAIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMAEHPNSMIPAFDQRNG
LRVIYKLMASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREHRGQINEEIGQCSSSPVQAVSG
MSRSVNVSVGPQQSDTKDSPLSSHITGNGDEKSSVEKTSSVESASSVELQTYNTSHEERK
TGQENEELLDEVPLEETLTNETVNTGDLEVSSDIIEAATVSSNSFKTTDKDTMTVSEVTA
SISSPSEEDASEVPELLDKLIVEEEDDDDYVELKVESSPTEEASLPTELQDNRLSPAASE
ASERLDVFNNDHKLIFQEEEPVSKKQTDIDTQDPKDSGILTMTASGSSATSPGTTASQTT
DQSDFGQMLEEGEKTADIAGETKLISESHGNILESPTTSEQRIAKLDVSSVATDTERLEL
KASGNMEASQPHQPVLEMSRQQEQPGQGIAPDTVNGQRRDSRSAFRIPEFKWSPMHQRLL
TDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLL
SAATSATHELENIEPTQGLSVEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGV
LRQCLRLGELYVSLYFMYLSPLDIVTGGISPVRDFDRLLQDMDINRLRAVVFRDIEDSKQ
AQFLALAVVYFISVLMVSKYRDILEPHNERHSQSFKESGSESGNLSLPDVESSPAASSPL
SPASVEESGSTSSARRRDSGIGEETATGLGSSVSVASPVAPPSVSAGPDAISEVLCTLSL
EVNKSQETKNDGGNELDNKAAPSVPVSKNVNVKDILRSLVNIPADGVTVDSALLPPAGLG
ALGDLSVEQPVQFRSFDRSVIIATKKSSALPSTLSTSIPTNAVSVVSSVDSAQASDVGGE
SPGGRSSNAKLPAVPTVGSVPQDQVSNMSITERLEHALEKAAPLLREIFVDFAPFLSRTL
LGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQ
TMKDHLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREDEKMCDHLIRAAKYRD
HVTATQLIQKIINILTDKHGAWGNSAVSRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPE
ATLKTAVEHAADEDILAKGKQSIKSQALGNQNSENEILLEGDDDTLSSVDEKDLENLTGP
VSLSHQRLETRADLARREVAGRCDELDPERHAPLPPIAQFEHRAAGQRAVVHEVEDAHLH
VRDHLTDLSDGLGDGRLARLAALSVVFIELVDQLGLSGDHVGAQTGSTSSFGLVGSFARG
LSLVARSWEEQLAVSVRETLGRDLQSTSREWRRLGAAVGSSGLQPSWGVRLASGPGLQEG
GAGARLLQASRAWDAQTLSAILPLAARSGRRSGQEGHLAAGSFVNRRVATTSSPLVGERL
RPRAWSCRPGLLAAFTESPGGDHGVVPPPRLGPRALFSGGAAQAARIFAPPLILAYTEGL
HGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNFPDPATVKKVVNYLPRVGIGTSF
GLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWV
ITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTAS
FVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPE
MFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRINRLALESEFVSCQLHQWIDLIFG
YKQQGPEAVRALNVFYYLTYEGAVNLNAITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR
GSAMQAYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLATPAVITVTANRL
FAVNKWHNLPAHQGAVPDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVHSQCFVIT
SDNRYILICGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCLTRSESYIGGNCYILSGSRDA
TLLLWYWNGKSSGIGDNPGSETAAPRAVLTGHDCEVTCAAVCAELGLVLSGSKEGPCLIH
SMNGDLLRTLEGPENCLNPRLIQASREGHCVIFYENGFFCTFSVNGKLQATMETDDNIKA
IQLSRDGQYLLTGGDNGVVVVWQVSDLKQLFAYPGCDAGIRAMALSYDQRCIISGMASGS
IVLFYNDFNRWHHEYQTRY
NT seq
9240 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagacaataatgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggaaagaagaaacccctgttgaagggggtgccttgtccctgaaaccagggctcccc
atcaggggcatcagaatgaaattcgccgtgttgactgggttggttgaagttggagaagta
tccaatagggatattgtagaaactgtctttaacctgctggtaggaggacagtttgattta
gaaatgaatttcattattcaagaaggtgagagtatcatctgcatggtggacctccttgaa
aaatgtgacgttacttgccaagcagaagtctggagcatgtttacagccattctgaagaaa
agtatacgaaatcttcaagtctgcactgaagtaggccttgttgaaaaagtgcttgggaaa
attgaaaaagttgacaatatgatagcagatcttttagttgacatgttgggagtgctggct
agctacaatttgacagttcgagaactaaagctgttcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctgggaagttgctgtctgtgttaaaacatatgcctcaaaag
tatggccccgatgcctttttcaactttccaggaaagagtgctgcagctattgcattacct
cctatagccaaatggccataccagaatggttttacatttcatacgtggcttagaatggat
cctgtaaataacatcaatgtggataaagataaaccatatttgtactgtttcagaaccagc
aaaggtctcggttattctgctcactttgttgggggctgtttaattataacatcaataaag
tcaaaaggaaaagggtttcaacactgtgtgaaatttgatttcaagccacaaaagtggtat
atggtaactatagtgcacatttataatcgatggaagaacagtgagctacgatgttacgtg
aatggtgagcttgcttcctatggagagataacatggtttgtcaacaccagtgataccttt
gacaaatgtttcctgggctcatcagaaacagcggatgctaatagggtattttgtggtcag
atgactgcagtttacctttttagtgaagctcttaatgcagctcagatttttgctatttat
cagctgggcctgggatacaagggtacatttaaattcaaagcagaaagtgacctgttcctt
gctgagcatcacaaacttttattgtatgatggcaaactctctagtgccattgcattcaca
tacaatccacgtgctacagatgcccagctctgccttgaatcatcccctaaggacaatcct
tcaatttttgttcattcaccgcatgcactcatgctccaggatgtgaaggcagttttaaca
cattccatccagagtgccatgcattcaattggaggagtacaagtgctgtttccacttttt
gcacagttggattataggcaatatttatctgaggaggttgacttgactatatgttcaact
ttgctggcttttatcatggagttgttgaagaactcaattgctatgcaagagcagatgctt
gcctgcaagggcttcttggtaataggatacagtcttgaaaagtcttccaagtcccatgtc
agcagagcagtacttgaactttgccttgcattttcgaaatatctgagtaatctgcacaat
gggatgcccctactcaagcagttgtgtgatcacattcttcttaacccagctatttggatt
catacccccgccaaggttcagttgactctctatacttacctgtccacggaattcattggc
acagtcaacatatataatgccattcggagagttggaacagtgcttctcatcatgcacaca
ctgaagtactactactgggcagtgaatcctcaggatcggagtggtatcaccccaaaagga
ctagatgggccacgacctaatcaaaaagaaatactttccctacgagcattcttgttgatg
ttcattaagcaattagtgatgaaggattctggagtaaaggaagatgagctacaggccatc
cttaattaccttctcactatgcatgaggatgacaatctaatggacgttctgcagctgctc
gttgcattaatggcagaacatcctaactctatgatacctgcttttgaccaaaggaatggg
ttacgtgttatctataaactgatggcatcaacaagtgaaggaatcagagtacaagctcta
aaggcaatgggttattttttaaaacatctggcaccgaaaagaaaagctgaagtcatgctt
ggacatggattgttttcactgttagctgaaagactcatgcttcagacaaatttaatcaca
atgaccacatataatgtcctttttgagattcttatagaacagatttgtactcaagtaata
cataaacagcatccagatcctgattcttcagtaaagatccaaaatcctcagatattaaaa
gtaattgcgaccctacttcgaaattctccccagtgtccagagagcatggaagttcgcaga
gcctttctttctgacatgattaaactttttaataacagcagagaaaacagaaggagcttg
ctgcagtgttctgtgtggcaagagtggatgctttctctctgctattttaatcctaagaat
tcagatgagcagaagataacagaaatggtatatgccatattcagaatcttactctaccat
gcagtcaaatacgaatggggtggctggcgtgtgtgggtagacaccttatcaatcacacat
tcaaaggtcacttttgaaatacacaaagaaaaccttgccaatatatttagggaacaccgg
ggacaaattaatgaagaaataggacagtgttcttcaagtccagttcaagcagtctctggc
atgagcaggagtgttaatgtttcagtaggaccccagcagtcagatacaaaggattctccc
ttgtcttctcatatcaccggaaatggtgatgaaaagtcaagtgttgagaagacaagttca
gtagagtctgcatccagcgttgaactgcaaacttataatacatctcatgaagaaaggaaa
actgggcaagaaaatgaggagctactggatgaagtccctttagaagaaacactgacaaat
gaaacagttaatacaggtgatttagaagtatcttctgacataatagaagctgcgactgtt
tcctctaattcttttaaaacaactgacaaagatacaatgactgtcagtgaagtaactgct
tccataagttctccttcagaagaggatgcttcagaggtgccagaattactggataagtta
atagtagaggaagaagatgatgacgattatgtagaactgaaggtagaaagtagccctact
gaggaagccagtctgcccacagagctccaggataatcgtttgtctccagctgcatctgaa
gccagtgaaagacttgatgtgtttaataatgaccacaaattaatatttcaagaagaagaa
cctgtaagtaagaagcaaactgacattgacactcaagaccctaaagattctggcatcttg
acaatgacagcatcggggtcttcagctacctcaccaggcactactgcttcccagacaact
gaccagtcagactttggtcagatgctggaggaaggggagaaaacagctgacattgccgga
gaaaccaaactaattagtgagtctcatggtaacatactcgagtctcctactacttctgag
cagaggattgctaagttggatgtttccagtgttgctacagatactgagagactggaattg
aaggctagtggaaacatggaagcatctcaacctcatcaacctgtgcttgagatgtcaagg
cagcaggagcagccagggcaaggaattgcaccagacacagttaatgggcaaaggagggat
tccagatctgcgtttcgtattcctgagttcaaatggtctccgatgcatcagcgtttgctc
actgatctcttattttcaatagaaacagatatacagatgtggagaagccattcaacaaag
acagttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcat
ctcatctctcaagtgatggacaatatggtcatggcttgtgggggtatactgccattgctt
tcagctgctacatcggctacacatgagctggagaatattgaacctactcaaggcctttca
gtagaagcctctgtgacatttttgcagagactaatcagtcttgtggatgtgcttatattt
gcaagttctcttggctttactgaaattgaagctgaaaaaaatatgtcatctggaggagtt
ttgcggcagtgtctccgactgggtgagctatatgtcagtttgtatttcatgtacttgagt
ccactggacattgtaactggtggtatatctccagtaagagattttgataggcttctgcaa
gacatggatattaatcggcttagagcagttgtcttcagagacatagaggatagcaaacaa
gctcaatttttagccttggcagttgtatattttatctctgttcttatggtctcgaagtac
agagacattttggaaccccacaatgaaaggcatagccagtcatttaaggaatctggtagt
gaaagtggaaatttatcactccctgatgtggaaagctcaccagcagcatccagcccgtta
tctccggcatcagtggaggaatcgggaagcacatcgtctgctcgaaggagggactcgggc
atcggggaagaaacagctactggtttaggaagcagtgtgagtgtagcttctcctgtggca
cctccaagtgtcagtgcaggccccgatgcaatcagtgaggtgctgtgcactctttcttta
gaagtcaataaatctcaggaaaccaaaaatgatggaggaaatgagttggataacaaggct
gcaccgtcagttccagtttcaaaaaatgtcaacgtgaaggacattctccgaagcttggtt
aacataccagcagatggagtcacagtggattctgccctcctgccaccagccggccttgga
gctcttggcgatctgtctgttgaacaacctgtgcagttcagatcttttgacagaagtgtc
atcattgcaacaaaaaaatcgtcagccttaccttccacactttctacaagtatacctacc
aatgctgttagtgtggtgtcttcagtagattcagcccaagcctcagatgtgggaggagaa
tcacctggtggtagatcatctaatgcaaaattacctgcggttccaacagttggttcagtt
ccacaagaccaagtttcaaatatgagtattacagagaggctcgaacatgctttggaaaag
gcagctcctcttctgcgagagatttttgtagattttgcaccttttctttctcggacactt
ttgggtagccacggacaagaactgcttatagaaggaacaagtctggtttgcatgaagtct
agtagttcagttgtggagttggttatgctgctgtgttctcaggagtggcagaattctatt
cagaagaatgctggccttgcttttattgaacttgtcaatgaaggaaggttgcttagccaa
acaatgaaggatcatctggtaagagtagcaaatgaagctgaatttatcctgagcaggcag
cgagcagaggatattcacagacatgcggaatttgagtcactgtgtgcccagtattctgca
gacaaacgagaagatgagaagatgtgtgaccatttgataagagcagctaaatatcgagac
catgtgacagcaactcagctaatccagaaaattatcaacattctcacagacaagcatgga
gcctggggaaattctgcagtgagtcgtcctcgtgagttctggcgcctcgactactgggaa
gatgacttgcggcgccggcgacgatttgtgcgtaaccctcttggatcgacacatcctgaa
gcgacactaaaaacagccgtggaacatgctgcagatgaagatatccttgctaaaggaaaa
cagtccatcaagagtcaggctttaggaaatcagaactcagaaaacgagatcctcctggaa
ggtgacgacgatactctgtcatccgtggatgaaaaagatttagagaatctcaccggccct
gttagcctgagccaccagcgtctggaaacgcgagcggatcttgcgcgccgagaggtagcc
ggacgctgtgatgaactcgacccagagagacatgctccgcttccgcccatcgctcagttt
gagcaccgcgcagccgggcagcgagccgtcgtccacgaagttgaagacgcccatctgcac
gtccgagaccaccttacagacctctcggatggtcttggcgatggccgccttgcgcgcttg
gcagcgctcagtgtagtatttattgagctggtagaccagcttggcctgagcggcgatcat
gttggggcacagactggtagcacgtcttcattcggcttagtcggatcttttgccaggggt
ctgtctttagtggccaggagttgggaagaacagttggcagtcagtgtccgcgaaactctg
ggacgcgaccttcagtcgacttctcgggagtggcggagacttggggcggctgtgggctcc
agtgggctccagccttcttggggtgtgcggctggcttcgggacctgggctgcaggagggt
ggagcgggggcccggctcctgcaggcttcgcgcgcgtgggacgcccagactctgtccgcc
atcctgccattggccgcgagatcaggccggcgctccgggcaggaggggcacttggcggca
gggagtttcgtgaaccgccgggtggccaccacttcatcgcccctggtcggggagcggctg
aggcctcgcgcgtggagctgccggcccgggctcctggcagcgtttacagaaagccccggg
ggtgaccacggtgtcgtccctcctccgcgcctgggcccgcgcgctctcttctcgggtggg
gcggcccaagcggcgcggatcttcgcaccaccactcatcctggcatatacagaagggctg
catggaaaatggctgttcacagagatacgatcaatcttttctcgtcgttatcttttgcaa
aatacagccttggagatctttatggcaaacagagttgctgtgatgttcaacttcccagac
cctgcaacagtgaagaaagtggttaactatctacctcgtgttggtattggaaccagtttt
ggattgcctcaaaccaggcgtatctcattagcgagtccacgtcaactttttaaagcttct
aatatgacccagcgatggcaacacagagagatttcaaattttgaatacttgatgtttctc
aacacaatagcaggacggagttacaatgatttaaatcagtatccagtgtttccctgggtc
attactaattatgaatcagaagaactggaccttactttgccaagtaacttcagagatttg
tccaagccaataggagctttgaatccaaaaagagcagcattctttgcagagcgttatgaa
tcctgggaagatgatcaagttccaaagttccactatggtactcattactcaactgcaagt
tttgttcttgcatggctgctaagaatagaacctttcacaacttatttcctaaatttgcaa
ggagggaaatttgaccatgcagatcgaactttttcatcaatttctagagcttggcgaaac
agtcagcgtgatacatctgatattaaggagttgatccctgaattttattatctccctgag
atgtttgtcaacttcaataattacaatcttggagtgatggatgatgggacagtggtgtct
gatgttgagcttcctccttgggccaaaacctcagaagaatttgttcgcataaacagattg
gccctggagagtgaatttgtttcctgccagcttcaccaatggattgatctcatttttggc
tataaacagcaaggaccagaggctgttcgagccctcaatgtgttttattacctgacctac
gaaggagctgtcaatctgaatgcaataactgatcctgtattgagagaggctgtcgaagct
caaatccgaagttttgggcagacaccttctcaactcctgatagagccacatcctccccga
gggtcagccatgcaagcgtatctcctcctgcagagtccgttgatgttcacagaccaagct
cagcaggatgttatcatggtcctaaagttcccctccaactcccccgtcactcatgtggcg
gccaacacccagcctgggctggcaactcctgctgtgatcaccgtcactgctaacaggctg
tttgccgtcaacaagtggcacaaccttcctgctcatcaaggtgctgtaccagaccagcca
taccagctgccagtggaaatcgatcctctcatagccagcaacacaggaatgcataggagg
caaatcaccgaccttttagaccaaagtattcaagtccattcccagtgctttgtcatcact
tcggacaaccgctacattctcatctgcggcttctgggataagagtttccgcgtctattct
acagacacaggaaaattgatccaagtggtatttggccattgggatgtcgtcacttgcctc
actcgttctgagtcatatatcgggggaaattgctacattctctcagggtcacgtgatgca
acccttctgctctggtactggaatggaaaaagcagtgggattggagataacccaggcagt
gagaccgccgccccgcgggccgttttgacgggccacgactgcgaggtcacctgtgctgcc
gtctgtgctgagctgggcctggtgttaagtggttctaaagaaggaccatgtctcatacat
tccatgaatggagacttgttgaggactttggagggccctgaaaactgcctgaacccaaga
ctcattcaggcttcaagagagggtcactgtgtcatattctatgaaaatggcttcttctgt
acattcagtgtgaacggaaaactccaggccaccatggaaactgatgacaacataaaggcc
atccagctgagccgggacgggcagtacctgctcacgggaggagacaacggtgtggtcgtg
gtctggcaggtgtctgacctcaagcagctctttgcctatccaggctgcgacgccgggatc
cgggccatggccctgtcctatgaccagaggtgcatcatttctggcatggcctcgggaagc
atcgtcctgttctacaacgactttaaccggtggcaccacgagtaccaaacccgctactga
DBGET
integrated database retrieval system
