Vicugna pacos (alpaca): 102538149
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Entry
102538149 CDS
T08098
Symbol
DCHS1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-16
KO
K16507
protocadherin-16/23
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
102538149 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102538149 (DCHS1)
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Cadherin related
102538149 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Ig_VWA7
Motif
Other DBs
NCBI-GeneID:
102538149
NCBI-ProteinID:
XP_031537139
UniProt:
A0A6J3ATH0
LinkDB
All DBs
Position
10
AA seq
3297 aa
AA seq
DB search
MQKVQGVAPSCLGLRSPRPLPLLSLLLLLLLLGAGVPGAWAQAGSLDLQIDEEQPAGTLI
GDISAGLPAGTAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVT
PDGATVEVTVRVADINDHAPAFPQARAVLQIPEHTALGTRYPLDPARDADAGRLGTQGYA
LSGDGAGETFRLETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQTLL
DVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEG
DGPFSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPS
MTVIFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVI
YLVCVARQLDREERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNVPAFDRQLYRPEP
LPEVALPGSFVVRVMARDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELE
PQPQLIVVATDGGLPPLSSSTTVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVT
ATDADSGPFGLLSYSLGAGLGASGPPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAVD
GGGLKSMVYVKVFVSDENDNPPHFYPREYAASLSAQSTPGTAVLRVRAHDPDQGPHGRLS
YHILAGNSPPLFALDEHSGLLTVAWPLARRANSVVQLEIGAQDGGGLQAEPSARVNISIV
PGTPLPPVFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVTLALSGGDPRGLFSLDG
ATGLLQTLRPLDRELLGPVLELEVRAGSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTV
LLPSSMAPGTPIYTLRALDPDSGINGRVTFTLLAGGAGAFTVDPTTGRVRLMGPLGPPGG
PAHELELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQ
VQARAPDGGPVTYHLAADGPSSPFGLEPHSGWLWVRAALDREAQELYTLKVMAVSGSKAE
LGQQTATATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLT
YSLRQLSEDSKAFRIHPQTGEVTTLQTLDREKQSSYQLLVQVQDGGSPPRSTTGTVHIAV
LDLNDNSPTFLQASGAAGGGLPIQVPDGAPPGTLVTTLQAKDPDEGENGTILYMLTGPGS
ELFSLHPHSGELLTAAPLIRAERPHYVLTLSAHDQGSPPRSSSLQLLVQVLPSARSAEPP
PDTSEPDPAAPVPVVLTVTATEGLRPGSLLGSVAPPESAEVGALTYTLVGGADPEGTFAL
DAASGRLYLARPLDFEAGPAWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPAFARDPL
ALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGL
DRETTPALLLLVEATDRPANASRRRAARVSARVFVTDENDNAPVFASPSRVRLPEDQPPG
PAALHVVARDPDLGEAARVSYRLAAGGDGYFRLHPSTGALSVVRSLDREQRAEYVLTVVA
SDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPDLGAN
GQVTYGGVSGESFSLDPDTGVLTTLQALDREEQEEINLTVYARDGGLPPLLTHVTVRVAV
EDENDHAPTFGSAHLSLEVPEGQDPQTLTTLRASDPDVGVNGQLQYRILDGDPSGAFVLD
QASGEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYS
VEVPEDAPPGTLLLQLQAHDPDAGANGRVTYYLGAGAAGAFLLEPSSGELRTAAALDREQ
CPSYAFTVNAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGSSLSTPTL
ALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVSLGPRDRVLFIVAT
DLGRPARSATGVVIVGLQGESERGPRFPRASSEAMLRENAPPGTPIVSPKAVHAGGSSGP
ITYSILSGNEKGTFSIQPSTGAITVRSAEGLDFEASPRLRLVLQAESGGAFAFSVLTLTL
QDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQPARGLFH
VDSATGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNSPTIPQPW
ELRVSEDALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSVGRYGGRLSLTGPLDFEQ
RDRYHLQLLAHDGPHEGHANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSAT
DRDSGVNGHVSYHLASPAEGFSVDPNNGTLFTTVGTLALGHEGPGVVDVVLEARDHGMPS
RTAQATVHVQLQDQNDHAPSFTLPHYRVAVTEDLAPGSTLLTLEATDADGSRTHATVDYS
IVSGNRGRVFQLEPRLAEAGESGGLGPRALGCLVLLEPLDFESLTQYNLTVTAADRGQPP
RSSTVPVTVTVLDVNDNPPVFTRSSYRVAVPEDTPIGAELLQVEASDADPGPHGLVRFTL
SSGDPLGLFELDESSGDLRLARPLDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVND
HGPAFPLSLLSTSLVENQPPGTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGHEAFALN
SSTGELRARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQ
VPEGARRGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGALYLRVDSRAPGSGT
GTSGSGGRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAV
AASLGVVVVLALAALVLGLVRARNRKAEAAPGPMSQAAPLASGSLQKLGREPPSPPPSEH
LYHQTLPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLA
ARGPDSGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGTGATLYREEGPTATATAFLG
GCGLSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFT
EIARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAIFPPASHRSPISH
EGSLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSAESGLEPPDDTELHI
NT seq
9894 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggtgcaaggcgttgcgccttcctgcctgggcctgcggagccccaggcctctc
cccctgctgtcgttgctgctgctgctgctgctactgggggccggggtgccgggagcctgg
gctcaggccgggagcttggacctgcagattgatgaggagcagccagcgggcacactgatc
ggggacatcagtgcagggcttccagcaggcacggctgcacctcccatgtacttcatttcc
gcccaggagggcagcggcgtaggcacagacctggccatcgacgaacacagtggggtggtc
cgtacagcccgagtcctggaccgagagcggcgggatcgctaccgcttcaccgcggtcact
cctgatggcgccaccgtggaagttaccgtgcgagtggctgacatcaatgaccacgctcca
gccttcccacaggctcgggctgtcctgcagatacctgagcatacagcccttggcacccgc
tacccgctggatcctgctcgtgatgcagacgctggccgccttggaacccagggctacgca
ctgtctggtgatggggccggagagaccttccggctggagacacgcccgggtccggatggg
gccccagtgcctgagctggtagttaccggggagctggaccgagagaaccgctcacactac
atgctgcaactggaggcttacgacggtggttcaccccctcgaagggcccagaccctgctg
gacgtgacactgctggacatcaacgaccacgctccagctttcaatcagagccgctaccac
gctgtagtgtctgagagcctggcccccggcagtcctgtcttgcaagtgtatgcctctgat
gctgacgctggtgccaacggggctgtaacttatgaaatcaaccggaggcagagcgagggt
gatggacccttctccatcgatgcacacacagggctgctgcggctggagcggccactggac
tttgagcaacggcgggtccatgaactggtggtgcaagcgcgggatggaggggctcaccct
gagctgggctcagcctttgtgactgtgcatgtgcgagacgccaatgacaatcagccctcc
atgactgtcatcttcctgagtgcagatggctccccccgagtgtctgaagctgccccacct
ggccagcttgttgctcgaatctctgtgtcagacccagatgatggtgactttgcccatgtc
aatgtgtccctggagggtggagagggccactttgcgctcagcacccaggacagcgtcatc
tacctggtgtgtgtggctcggcagctggatcgggaggaacgggatgcctataacttgcga
gttaccgccaccgactccggctcccccccactgcgagccgaggccaccttcgtgctgcac
gtcactgatgtcaacgacaacgtgcctgcctttgaccgccagctctaccgaccagaaccc
ctgcctgaggttgcactgcctggcagcttcgtggtgcgggtgatggcacgggatcctgac
cagggcaccaacggtcaggtcacctatagcctggctccaggcgcccatacccgctggttc
tccatcgaccccacctcaggcatcatcaccacagctgcctcgctggactatgagttggaa
cctcagccacagctgattgtggtagccacggatgggggcctgccccctctctcttcctcc
accacagtgagtgtggccttgcaagacgtgaatgataatgagccacagttccagagaact
ttctacaacgcctcactgccggagggcacccagcccggaacctgctttctgcaggtgaca
gccacagatgcagacagtggcccatttggcctcctctcctattccttgggtgccggactt
ggggcctcagggcctcctccattccgcatcgatgcccacagtggcgacgtgtgcacaacc
cggaccctggaccgcgatcaggggccttcaagctttgacttcacagtgacagctgtggat
gggggaggcctcaagtccatggtatatgtgaaggtgtttgtgtcagatgagaatgacaac
ccgccccacttttatccacgggagtatgctgccagcctgagcgcccagagtactccaggc
acagctgtgctgagggtgcgtgcccatgaccctgaccaggggccccatgggcgactctcc
tatcacatcctggctggcaatagcccaccactctttgccttggatgagcactcagggctg
ttgacagtagcctggcccttggccagacgggccaactctgtggtgcagctggagatcggg
gcgcaggatggaggtggcctgcaggcagagcccagtgcccgagtcaacatcagcatcgtg
cctggaactcccctgccaccagtatttgagcaactacagtatgtcttttctgtgccagag
gatgtggcaccaggcaccagtgtgggcgtagtccaggcacacaaccccccaggtcgcctg
gggcctgtgaccctcgccctctcaggcggggatccccgagggctcttctccctagatgga
gccacaggactgttacaaacgcttcgccctctggaccgggagctgctgggaccagtgctg
gagctggaggtgcgggcaggcagtggtgtgcccccggcttttgctgtagctcgggtgcgt
gtgctgctggatgatgtgaatgataactcccctgccttccctgcgcctgaagacacagtg
ttgctgccatcaagcatggccccagggacccccatctatacactgcgggctttggacccc
gactcaggcattaacggtcgggtcacctttaccctgcttgctgggggtgctggggccttc
actgtggaccccaccacaggccgcgtacggctaatgggacctctggggcctccagggggg
ccagcccatgaactggagctggaagcccgggatgggggctccccaccccgcaccagccac
tttcgactgcgagtggtggtacaggacttggggacccgcgggctggctccccacttcgac
agccctacctaccgtgtggacctgccctcaggcaccacccctggaactcaggtcctgcaa
gtgcaggctcgagcaccagatgggggccctgtcacctaccatcttgcagcagatgggccc
agtagcccctttggcctggaaccacatagtgggtggctatgggtgcgagcagcactggac
cgtgaggcccaggagttgtacacactgaaggtaatggcagtgtctgggtccaaagctgag
ctggggcagcagacagccacagccaccgtgagggtcagcatcctcaaccagaatgaccac
agtcctcgcttgtctgaggagcccaccttcctggctgtggctgagaaccagcccccaggg
accagtgtgggccgggtctttgccactgaccgagattcaggacccaatggacgtctgacc
tacagcctgcgacagctgtcagaagacagcaaggccttccgcatccacccgcagactgga
gaggtgaccacactgcaaaccctggaccgtgaaaagcagagcagctaccagctcctggtg
caggtgcaggatggggggagcccaccccgcagtaccacaggcacagtacacattgcagtc
ctcgacctcaatgacaacagccccaccttcctgcaggcttcaggggctgctggtgggggc
ctccctatacaggtaccagatggtgcgcctccaggaacactggtgacgacgctgcaggcc
aaggatccggatgagggggagaatggaaccatcctgtacatgctaactggtcccggctca
gagctcttctctctgcaccctcactcaggggagctgctcactgcagcacccctgatccgg
gcagaacggcctcattatgtactgacactcagtgctcacgaccaaggcagcccccctcgg
agctccagcctccagctgctggtccaggtgcttccctcagctcgctctgctgagcctcca
ccagatacctcagagccagacccggcggcgcctgtgcccgtggtgctgaccgtgacagca
accgagggtcttcggcccggctcccttttgggctccgtggcgccgccagagtcggcagag
gtgggcgcactcacctatactctggtgggcggcgccgaccccgagggcaccttcgcgctg
gatgcggcctccgggcgcttgtacctggcgcggcccctagacttcgaggcgggcccggcg
tggcgcgcgctcacagtgcgagccgaggggccgggaggcgcgggcgcgcggctgctgcgg
gtgcaggtgcgcgtgcaggacgagaatgagcatgcgccggccttcgcgcgcgacccgctg
gcgctggcgctgccggagaaccccgagcccggcgccgcgctgtacacttttcgcgcgtcc
gacgccgacggcccgggccccaacagcgacgtgcgctaccgcctgctgcgccaggagccg
cccgtgcctgcgcttcggctggacgcgcgcaccggggcgctcagcgcaccgcgaggcctg
gaccgggagaccacacctgctctgctgctgcttgtggaagccaccgaccggcccgccaac
gccagccgccgccgcgcagcacgcgtttccgcgcgcgtctttgtcacggatgagaatgac
aacgctccggtctttgcctcgccttcacgtgtgcgcctccccgaggatcagccgcctggg
cccgcggcgctgcatgtggtagcccgggacccggacctgggcgaggccgcacgcgtgtcc
tatcgcctggcagctggcggggacggctatttccggctacaccccagcaccggagcgctg
tccgtggtgcggtccctagaccgcgagcagcgagctgagtatgtgctgactgtggtggcc
tccgaccacggctccccgccgcgctcagccacgcagctcctgactgtcagtgtcgccgat
gtcaacgatgaggcacccgctttccagcagcaggagtacagcgtcctcttgcgtgagaac
agcccgcctggcacatctctgctcactctgcgggcaaccgaccctgacctgggggccaat
gggcaggtgacttatggaggcgtctctggcgaaagtttctccctggacccagacactgga
gttcttacaactcttcaggccctggatcgggaggagcaggaggagatcaacctgacagtg
tatgcccgagatgggggcttgcctccgctgttgacccatgtgacagtgcgagtggctgtg
gaggacgagaatgaccatgctccaacctttgggagtgcccatctctccctggaggtgcct
gagggccaggacccccagacccttaccacgctgcgggcctctgacccagacgtgggagtc
aatgggcaactgcagtaccgcatcctggatggagacccctcaggagcctttgtcctagac
caagcttctggggagtttggcaccatgaggccactagaccgggaggtggagccagcattc
cagctgcagatagaagcccgggatggaggccagccagctctcagtgccactctgcttgtg
acagtgacagtgctggatgccaatgaccatgccccagccttccctgtgcctgcttactct
gtggaggtgcctgaggatgctcctccagggaccctgctgctgcagctacaggctcatgat
cctgatgctggggccaatggccgcgtgacctactacctgggtgcaggggcagcaggagcc
ttcctgctggagcccagctctggggaattgcgcacagccgcagccctggacagagaacag
tgtcccagttatgcctttactgtgaacgcagtggatggtgcagctgctgggcccctaagc
accacagtgcctgtcaccatcaccgtgcgtgatgtcaacgaccacgcacccacctttccc
accagtcccctgaggctgcgcctgccccgcccaggctctagcctcagcaccccaaccctg
gctctggccactttgcgagctgaagaccgtgatgctggtgccaatgcctccatcctatac
cggctggcaggcacaccacctcctggcaccactgtggactcttacactggtgaaattcgt
gtggcccgatcccctgtatccctgggccccagagatcgtgtccttttcattgtggccacc
gaccttggccgtccagctcgctctgccacaggtgtggtcattgttgggctgcagggggag
tctgagcgtggaccccgctttccccgggctagtagtgaagccatgctccgtgagaatgca
cccccagggactcccattgtctcccctaaggctgtccatgcaggaggctcaagtggaccc
atcacctacagcatcctcagtgggaatgagaaagggacattctccatccagcctagtaca
ggagccatcacagttcgctcggccgaggggctggactttgaggcaagcccacggctgcga
ctggtgctgcaggcggagagtggaggagcctttgctttctccgtgctgaccctaaccctg
caagatgccaatgacaatgctccccgcttcctgcggcctcactatgtggcctttctgccc
gagtccaggcctttggagggacccctgctgcaggtggaggcagatgacctggatcaaggc
cccagtggacagatctcctacagtctggccgcatcccaaccagctcggggattgttccat
gtagactcagccacgggcactatcactaccacagctatcctggaccgtgagatctgggcc
gaaacacggcttgtactgatggccacagacagaggaagcccagccctggtgggctcagct
accctgacagtgatggtcattgacaccaatgacaacagccccaccattccccagccctgg
gagctccgagtgtcagaagatgcactattgggctcagagattgcacaggtaacagggaat
gacgtggactcaggaccagtgctgtggtatgtgctgagcccatctggaccccaggatccc
ttcagtgtaggccgctatggaggccgcctctccctcacgggccccctggatttcgagcag
cgtgaccgctaccacttgcagctgttggcacatgacggacctcatgagggccatgccaac
ctcacggtgcttgtggaggatgtcaatgacaatgcacctgccttctcccagagcctctac
caggtgatgctgcttgagcacacacccccaggcagtgccattctctccgtctctgccact
gaccgggactcaggtgtcaatggtcacgtctcctaccacctggcttcccctgctgagggc
ttcagtgttgaccccaacaacgggaccttgttcacaacagtgggaacattggccttgggt
catgaagggccaggagtggtggatgtggtgctggaagcacgagatcatgggatgccgagc
cggacagcacaagccacagtgcatgtgcagctgcaggaccagaatgaccatgccccgagc
ttcacactgccacactaccgtgtggctgtgactgaggatctggcccctggttccaccctg
ctcaccctggaggccacagatgctgatggaagtcgcacccacgccactgtagactacagc
attgtcagtggcaaccggggccgagtcttccagctggaaccccggctggctgaggctggg
gagagtggtggactaggcccccgggcactgggctgcctggtgttgcttgagcctctagac
tttgaaagcctaacccagtacaatctaactgtgactgcagctgaccgggggcagccacct
cgcagctcaactgtgccggtcaccgtcactgtgctggatgtcaatgacaacccacctgtc
ttcacccgctcatcctaccgcgtggcagtacccgaggacacgcccattggagccgagctg
ctgcaggtggaggcctctgacgctgacccaggccctcacggcctggtgcgtttcaccctc
agctcaggcgaccctttggggctctttgagctggatgaaagctcgggcgacttgcgactg
gcccgccccttggactgtgagacccaggctcgacatcagcttgtcgtgcaggctgccgac
cctgccggggcacactttgctctagcaccagtgaccatcgaggtccaggatgtgaatgac
catggcccggctttcccgttgagcttgctcagcaccagcctggtggagaaccaacctcca
ggcactcttgtgaccacgctgcatgctattgatggggacgctggggctttcgggaggctc
cactacagcctgctggaggctgggccagggcctgagggccatgaggcgtttgcactgaac
agctcaacaggggagttgcgggcacgagtggcctttgactacgagcacacaggaagcttc
cagttgctggtgggtgctaccgatgctgggaatctatcagcctcagtcaccgtgtcagtg
ctggtgactggcgaggatgagtatgatccagtattcctggctccagctttccacttccaa
gtgccagaaggtgccaggcgtggccacagcctgggtcatgtgcaggccacagatgaggat
ggaggtgctgatggcctggtgctctattcccttgccacctcttccccctattttggtatc
aaccagactacaggtgccctatacctgcgggtggacagccgggcaccaggcagtggaacg
ggcacctctgggagtgggggccggacccggcgagaggcaccacgggagctgaggctggag
gtggtggcacgggggcctctgcctggttcccggagtgccacggtgcctgtgactgtggac
atcacccacactgcgctgggcctggcacccgacctcaacctgctattggtgggggctgtg
gcggcctccctgggagtcgtggtggtgcttgcactggcagccctggtgctcgggctggtg
cgggcccgtaaccgcaaggctgaggcagcgcctggcccgatgtcacaggcagcacccctg
gccagtggctccctgcagaagctgggccgagagccccccagccctccgccctcagagcac
ctgtatcaccagactctccccagctacggtgggccaggagctggaggaccctacccccgt
ggtggctccctagacccttcacactcaagtggccgaggctcagcagaggctgcagaggat
gacgagatccgcatgatcaacgagttcccgcgtgtggccagtgtggcctcctcgctggct
gcccgtggcccggactccggcatccagcaggatgcagatggactgagtgacacatcctgt
gagccacctgcccctgacacctggtataagggccgcaaggcagggctgctgctgccaggc
acaggagccactctgtaccgagaagagggccccacagccactgccacagccttcttgggt
ggctgtgggctaagccccgcacccaccggggactatggctttccagcagatggcaagcca
tgtgtggcaggtgcgctgacggccattgtggccggtgaggaggagctccgtggcagctat
aactgggactacctgctgagctggtgccctcagttccagccgctggccagcgtcttcaca
gagatcgcccggctcaaggatgaagctcggccatgtcccccggctccccgtattgacccg
ccacccctcatcactgctgtggcccacccaggagccaagtctgtgccccccaagccagcc
agcacggctgcaactcgggccatcttcccaccggcctctcaccgctccccaatcagccat
gagggttccctgtcctcagctgccatgtcccccagcttctccccatcgctgtctcctctg
gctgctcgctcacctgttgtctcaccatttggggtggcccagggcccctcagcctcagca
ctcagtgcagagtccggcctggagccacccgatgacacagagctgcacatctag
DBGET
integrated database retrieval system
