Vicugna pacos (alpaca): 102538184
Help
Entry
102538184 CDS
T08098
Name
(RefSeq) contactin-6
KO
K06761
contactin 3/4/5/6
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102538184
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
vpc00537
]
102538184
Cell adhesion molecules [BR:
vpc04515
]
Immunoglobulin superfamily
Contactins
102538184
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
vpc00537
]
Others
102538184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
C2-set_2
C2-set_3
Ig_6
V-set_CD47
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
102538184
NCBI-ProteinID:
XP_031542159
UniProt:
A0A6J3B7L8
LinkDB
All DBs
Position
17
AA seq
1028 aa
AA seq
DB search
MRLLWKLVILLPLISACAGDGHLSRPIFTQEPQDVIFPLDLSKSEIILNCAANGYPSPHY
RWKQNGTDIDFTTSYHYRLDGGSLAISSPHTEQDIGTYQCLATNPLGTILSRKAKLQFAY
IEDFETKTRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGN
LYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVHFPETIQAA
KDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAG
NLRGRNLAKGQLIFYAPPEWEQKIHNTYLSIYDSLFWECKASGKPNPWYTWLKNGERLNP
EERIQIENGTLIITMLNVSDSGIYQCTAENKYQIIYANAELRVLASAPDFSKNPIKKNSV
VQVGGDIAIECKPNAFPRATISWRRGMESLRQSKRVFLLEDGSLKIYNVTRSDAGSYTCI
ATNQFGVAKNTGSLVVKEKTVITVPPSKMDVTVGESIVLPCQVSHDPSIQVVFIWSFNGD
VIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAIAEIIVRGPPGP
PEDVKVEHISSTTSQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTHNA
TVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVIT
WESIPEELQNGEGFGYIIMLRPVGSTTWTKERVLSVESSRFVYRNENIIPLSPFEVKVGV
FNNEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV
LYWTDNFKESMIGKIRVSGNVTTKNITGLKANTLYFASVRAYNTAGTGPSSPPVNVTTKK
SPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRGVPVLEARVHFLSVVTIILY
CSAIQALK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactggtaattctgctgccactcataagtgcttgtgcaggtgat
ggtcatttgagccgtcctatttttacccaggaaccacaagatgttatttttcctttggat
ttgtcaaaatctgaaatcatcctgaactgtgctgctaatggttacccttcaccccattac
aggtggaagcaaaatggcacagacattgattttaccacgagttatcactacaggttggac
ggaggcagtctggcaatcagtagccctcacacagagcaagatattggcacataccagtgt
ctggccaccaaccctctgggaacaattctgagtcggaaagcaaagctccaatttgcatat
attgaagactttgaaactaaaacaagaagcacagtgtccgtccgagaaggtcaaggtgtg
gtgcttctttgtggcccaccaccacactttggagatttatcttatgcgtggactttcaat
gataaccccttatatgtccaagaggacaaaaggcggtttgtatcacaagagacaggaaac
ttgtacattgctaaagtggaaccatcagatgttggcaactacacttgcttcataacaaac
aaggaagcccagagaagtgttcaagggccacctactcctttagtgcagcgcactgatggt
gtgatgggggaatatgaaccaaagattgaagtgcattttcctgaaactatacaagctgca
aaggattcatctgtaaaactggaatgctttgcccttggaaatccagtccctgatattagt
tggaggaggttggatggaagcccgttgccagggaaagtcaagtacagcaaatcccaagct
atccttgaaatcccgaactttcaacaggaagacgaaggcttctatgagtgcattgcaggc
aaccttcgaggacgaaatcttgcaaagggtcaactcattttctatgcccctccagaatgg
gaacaaaaaatccacaatacatacttgtcaatctatgacagcttgttttgggaatgcaaa
gctagtggaaagcctaacccttggtacacgtggttaaagaatggtgaacgcctcaatcca
gaggaaagaattcaaatagaaaatgggacacttatcataactatgctgaatgtgtcagat
tctggtatctaccaatgtactgcagaaaacaaatatcagataatttatgcaaatgcagaa
ttgagagtattagcttcagctcctgatttctccaaaaatcctattaaaaaaaattcagtt
gttcaagttggtggagatattgctatcgaatgcaaaccgaatgctttccctagggctact
atttcctggagaagaggaatggagagcctgagacaaagcaaaagagtgtttctcttagag
gatggcagcctcaagatatataacgttaccaggtcggatgctggatcatatacttgcata
gctacaaatcagtttggtgttgcaaagaacacgggcagcctagtcgtaaaagagaagact
gttattactgttccaccttccaaaatggatgttacagttggcgagagtatagtcctacca
tgccaggtgtcccatgatccctccattcaagttgtgtttatatggtctttcaatggagat
gtcatagacttaaaaaaaggagtggctcattttgagaggattggaggagaatctgttggg
gatttgatgataagaaatattcagttaaatcattcaggaaagtatctatgcacagtaaaa
acaactctagaaagtttatcagctatagctgagatcattgtgagaggtcccccaggtccc
ccagaagatgtaaaagtggaacatatttccagtactacttctcaactaagctggagacca
ggctcagataataacagccccattcaaatatttagtattcaggctcggacaccattttct
gtgggttggcaggctgtttccacagttccagaaattctcaatggtaagacacacaatgcg
acagtggttggtttgagtccttgggtggaatatgagtttcgtgttgttgctgggaacagc
attgggattggagaaccaagtaaaccatcagaactgttaagaactaaagcatcagtccct
gtcgtggcaccaacaaacatcaatggaggtggaggaagtcgctctgaactcgtcattacg
tgggagtcaattccagaagaactacagaatggagagggatttggatacatcatcatgctg
cggccagttggctcaacaacctggaccaaggaaagggtactgtctgtagagtcgtcaagg
tttgtttacagaaatgaaaacatcatccctctttctccttttgaagtcaaagtgggtgta
tttaataacgaaggagaaggatccctgagtactgtatccattgtatactctggggaagat
gaacctcaactagccccaaggggaacctctgtccaaagtttttctgcttcagaaatggag
gtttcatggaatgctattgcctggaacagaaacactggaagagttctgggctatgaggtc
ttatactggacagacaacttcaaagaatctatgattggtaaaattagagtcagtggaaat
gtcacaaccaaaaacatcacaggactgaaagctaacactctctactttgcttctgtgaga
gcttacaacactgccggcacagggccctcaagccccccagtcaatgttaccaccaaaaag
tctcctccaagccaaccaccagctaacattgcctggaaactgaccaattcaaaattatgc
ttaaactgggagcatgtaaaaaccatggaaaatgagtctgaagtgttaggctacaagatt
ctataccggcaaaacagacagagtaaaactcatatattggaaacaaacaacacatctgct
gagcttctagttccatttgaagaggactacttgattgaaataagaacagttagtgatggt
ggggatggaagcagcagtgaggaaattaggattccaaaaatgtcaagtttgagttccaga
ggagtaccagtattagaagctagagtccatttcctgtcagttgttacaattattttgtac
tgttctgctattcaggcacttaaatga
DBGET
integrated database retrieval system