Vicugna pacos (alpaca): 102538237
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Entry
102538237 CDS
T08098
Name
(RefSeq) short transient receptor potential channel 2-like isoform X3
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102538237
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102538237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
HEAT_HEATR1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
102538237
NCBI-ProteinID:
XP_006203454
UniProt:
A0A6I9I4Q3
LinkDB
All DBs
Position
10
AA seq
1262 aa
AA seq
DB search
MAPVKISHVVSFSSQDAKYPVENLLHPESQRGPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFVTLLPATMLMSLADSKQGKNRSGVRMFKDDDFLAP
ASGESWDRLRLTCSQPFTRRQSFGLAFLRVCSSLDSSDDPVVGPSAPESSGLSQGSSDAQ
ESGPSPWLANPSIRRTFFPEPQTSTKDISELRNILKQLQPGTLGRSACMVLSAACKAPLA
HAASPKNNHAESGPSHRESTESKPKEQKSKNDDSRTKKRKVQAQGPVSNSKSRSNQRRLA
KAGQREHSQPQAQSSGVPESGQCPICAGSFSIEMLPQHAATCGETSSPSPTSPSSSPSSS
PAVLRFHHVALTPVPLVSRPQPNWTEIINRKLKFPPPLLGAIQEGQLGLVQQLLESGIEA
TGGGPGRPLRNVEEAEDRSWREALNLAIHLGHEAIMDVLLANVKFDFRQIHEALLVAVDT
NQLAVVRRLLARLEREKGRKVDTKSFSLAFFDSSVDGSRFAPGITPLTLACQKDLYEIAQ
LLMDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLA
AFQLSRELRRLARKEPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDLGTDSKTE
PEAEGLGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWK
LFIAFLIFLTMPFLCLGYWLAPKSQLGRLLKIPVLKFLLHSASYLWFLLFLLGESLVMET
QLSTFRGRSQSVWETSLHMVWVAGFLWFECKEVWIEGLRSYLLDWWNFLDMVILSLYLAA
FTLRLLLAGLTHMHCQDAPGGAACHYFTTAERSEWRTEDPQFLAEVLFAITSMLSFTRLA
YILPAHESLGTLQISIGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNET
FQFLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIE
DDADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAIFYLLRRICRFICCCCSYCKTKK
PDYPPIPTFANPRAGAGSGEEEHGSYHLCVIKALVQRYIETARQEFEETRRKDMGNRLTE
LTKTVSRLQSEVAGVQRTLVEGGTRRPPDGASILSRYITRVRNSFQNLGPPIPETPELTV
PGIVGTQVSSETGLQDAGGARTPASRESGPSSPAHVLVHREQESEGAGDLPQEEDLGTKE
GS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtgaagattagccatgttgtgtcattttcctctcaggatgccaaatatcca
gtggagaacttgctgcacccagagagtcagaggggaccttggctcagctgccctcaggac
aagagcgggcaactaaaagttgagctgcagctggagagggcagtgccgatcggctacatc
gacgtgggtaactgtggctgtgctttcctgcagattgatgtaggtcgttcttcctggtcc
ctggatagacctttcgtcaccctgctgcctgcaaccatgctaatgtccctggctgattca
aagcaggggaaaaaccgctcaggggtccgcatgtttaaagatgatgatttcctggctcca
gcctcaggtgagtcatgggatcgacttcgcctgacctgctcccagcccttcacccgtcgt
cagtcctttggcctggccttcctgcgggtgtgttcctctctggactcctcagatgaccct
gtcgtgggtccgtcagccccagagagctctgggctgagccagggctcttctgatgctcag
gagtctggtcccagcccctggctggctaatccttccatccggaggacattcttcccagaa
ccccaaacgagcaccaaggacatttcagagctcaggaatatcctaaagcagctgcagcca
gggacattggggcgttcagcctgcatggtgctttcagctgcctgcaaggctcctttagcc
catgcagcaagcccaaaaaacaaccatgcagaatcaggtcccagtcatcgggagagcaca
gagtccaaaccaaaggagcaaaagtcaaagaatgatgacagcaggacaaagaaacggaaa
gtgcaagcccaggggcctgtttccaactcaaagtctcgatcaaaccagaggaggctagca
aaggcagggcaaagagaacatagccaaccccaggcccagagcagcggtgtcccagagagt
ggacagtgccccatttgtgcaggctccttcagcattgagatgcttccccagcacgctgcc
acctgcggagagacctcctcaccttcccccacctctccctcctcgtcaccatcttcatca
ccagctgtgctaagatttcatcatgtggcactaacaccagttcccctggtctccaggcca
cagcccaactggacggagatcataaacagaaaactgaagttcccacctccactgctgggt
gccatccaggaggggcagctgggccttgtgcagcagctgctggagtcggggatcgaggcc
acgggcggcgggccaggcagacccctgcggaatgtggaggaggccgaggaccgctcctgg
agggaagccctcaatctggccatccacctgggccacgaggccatcatggatgtgcttttg
gccaatgtgaagtttgacttccggcagatccacgaggccctgcttgtggccgtggacaca
aaccagctggcagtggtgcgccgcctgctggcccggctggaacgggagaagggccgcaag
gtggacaccaagtctttctcactggctttttttgattcatcagtcgacggctctcgcttt
gcacccggcatcaccccactcaccctggcctgccagaaggacctatatgagattgcacag
ctgctcatggaccagggccacaccatcgcccggccccaccctgtctcctgtgcctgcctc
gagtgcagtaatgcacgccgctacgacctgctcaagttttccctgtcccgcatcaacacc
taccgtggcatcgccagccgcgcccacctctcactggccagtgaggacgccatgctggct
gccttccagctcagccgcgagctcaggcgcctggcccgtaaggagcctgagtttaagccc
gagtacattgccctggagtcgctgagccaggactacggctttgaattgctgggcatgtgc
cggaaccagagcgaggtcaccgcagtgctcaatgacctgggcacggacagcaagactgag
cccgaggctgagggcctgggccaggcctttgaggaaggcatccccaacctggcaaggctg
cgactggccgtcaactacaaccagaagcggtttgtagcacatcccatctgccagcaagtc
ctgtcctccatctggtgtgggaacctggctggctggcgtgggagcaccaccatctggaag
ctcttcatcgccttcctcatcttcctcaccatgcccttcctctgcctgggctactggctg
gcacccaagtcccagctgggccgcctgctgaagattccggtgctgaagttcctgctgcac
tcggcttcctatctgtggttcctccttttcctgctgggagagtccttggtcatggagaca
cagctgagtaccttccgtggccgcagccagagcgtctgggagacttcactacacatggtt
tgggttgcaggcttcctgtggtttgagtgtaaggaagtgtggatcgaggggctgcgcagt
tacctcctggactggtggaacttcctggacatggtcatcctgtccctgtacctggcggcc
ttcacgctgcgcctcctcctggccgggctgacccacatgcactgccaggatgccccgggt
ggtgctgcctgccactacttcaccacggctgagcggagtgagtggcgcacagaggacccc
cagttcttggctgaggtgctctttgccatcaccagcatgctcagcttcacccgcctggcc
tacatcctgccggcccatgagtcgctgggcaccctgcaaatttccattggcaggatgatc
gacgacatgatccggttcatgttcatcctcatgatcatcctgaccgccttcctctgtggc
ctcaacaacatctatgtgccctaccaggagacggagcgtctgggcaatttcaatgagact
ttccagtttctgttctggaccatgtttggcatggaggagcacagcgtggttgacatgcct
cagtttctggtgcctgagtttgtgggccgagctctctacggcatcttcaccatcgtcatg
gtcattgtgctgctcaacatgctcattgccatgatcaccaactccttccagaagattgag
gatgacgctgacgtggagtggaagtttgctcgctccaagctctacctgtcctacttccgg
gaaggcctgacgctgccagtgcccttcaacatcctcccctcccccaaggccatcttctac
ttgctcaggagaatttgtcggttcatttgctgttgctgctcctactgcaaaaccaagaaa
ccagactatcccccaatccccacttttgccaatcctcgggcaggggcaggatctggggag
gaagagcatggatcctaccacctttgtgtgatcaaggccctggtacagcgctacatagag
actgcccggcaggagttcgaagagacccgtcggaaagacatgggaaacaggctgacagag
ctgaccaagactgtctctcgactgcaaagtgaggtcgccggtgtgcagaggactctggta
gagggagggacacgtcggccacccgatggtgccagcatcctcagtcgctacatcacccga
gtgcgcaacagcttccagaacctgggcccccccatccccgagaccccagagctgacagta
ccagggatagtggggactcaggtgtcttcagaaactggacttcaggacgccggaggggcc
aggactccagcttccagagagtcaggcccttcctccccagctcacgtgttagtgcacagg
gagcaagaatcagagggggctggggacctgccccaggaggaagatttgggaaccaaggag
gggtcctga
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