Vicugna pacos (alpaca): 102538291
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Entry
102538291 CDS
T08098
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04140
Autophagy - animal
vpc04142
Lysosome biogenesis
vpc04148
Efferocytosis
vpc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
102538291 (VPS41)
04140 Autophagy - animal
102538291 (VPS41)
04148 Efferocytosis
102538291 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102538291 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102538291 (VPS41)
Membrane trafficking [BR:
vpc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
102538291 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
VPS18_solenoid_2nd
zf_RING_Vps8_fungal
Vps39_1
TPR_PEP5_VPS11
zf-RING_5
zf_RING_Vps8
TPR_YpiA
RIG-I_C
zf-rbx1
CofB_pilin_dom
zf-RING_11
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
102538291
NCBI-ProteinID:
XP_015090064
LinkDB
All DBs
Position
7
AA seq
756 aa
AA seq
DB search
MGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFLRSSCKQFVTGGKKLLLFERSW
MSRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMY
PCSLCWKDSVTLIIGWGTSVKICSVKERHASEMRDLPSRYVEIVSQFETELHVSGLAPLC
DQLVVLSYVKEVSEKTEREYCARPRLDIIQPLPETCEEVSSDALTVRGFQENECRDYHLE
YSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIG
LAYVNHLVEKGEYDVAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKP
LIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELY
TYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKI
SIKKVVEELEDRPELQHVYLHKLFKRDHHKGQAYHEKQISLYAEYDRPNLLPFLRDSIHC
PLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWED
LILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLRE
GCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPVLPSDAAKPFSVVVFHCRHMF
HKECLPAPSLNSPAQFCNICSAKHRGPGSAILEMKK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgtgttcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaa
tttcacgagacttttgactgtcccattaaaatcatcgctgtacatccgcatttcttgaga
tccagctgcaagcagtttgtgaccggagggaagaagttgctgctgttcgagcgctcttgg
atgagcaggtggaagtcctccgttctgcacgaaggggaagggaacatcaggagtgtgaag
tggagaggccatctgatcgcctgggccaataatatgggtgtgaagatttttgatatcacc
tccaaacagagaatcaccaacgtgccccgggatgatataagtctgcgccccgatatgtac
ccctgcagcctctgctggaaggacagcgtgaccctgattatcggctgggggacgtctgtc
aagatttgctcggtgaaggaacggcacgccagtgagatgagggacttgccaagtcgatac
gttgaaatagtgtctcagtttgaaactgaactccacgtcagcggactggcacctctctgc
gatcagctcgttgtactttcctacgtaaaggaggtttcagagaaaacggaaagagagtac
tgcgccaggcccagactggacatcatccagccacttcccgagacgtgtgaagaggtctct
tctgatgctctgacagtgagaggctttcaggagaacgaatgcagagattatcacttagag
tactcagagggggagtcactcttctacatcgtgagcccaagagatgtcgtcgtagccaag
gagcgggaccaagatgaccacatcgactggctccttgaaaagaagaaatacgaagaagct
ctgatggcagctgaaattagccagaagaacattaaaagacataagattctggacattggc
ttggcgtatgtaaaccacctggtggagaaaggagagtatgacgtagcggcacgcaaatgc
cagaaaattcttgggaaaaatgcagcgctctgggaatacgaagtttataaatttaaagaa
attggacagcttaaggctatcagtccttatttgccaagaggggatccagttctgaaacca
ctcatctatgaaatgatcttacacgaatttttggaaagcgattatgagggctttgccacg
ctgatccgggaatggcccggagatctgtacaacaattcggtgatagttcaagcagtccgg
gatcacctgaagaaagacagtcagaacaggaccttacttaaaaccctggcagaactgtac
acctatgacaaaaactatggcaacgctctggaaatatacttgacgttaagacataaggat
gttttccagttgatccacaagcataatcttttcagttctatcaaggataaaattgtctta
ttaatggattttgattctgagaaagctgttgacatgcttctggacaatgaggataaaatt
tcaattaaaaaggtcgtggaagaattagaagacagaccagagttgcagcacgtgtacctg
cataagctgttcaaaagagaccatcataaggggcaggcctaccatgaaaagcagatcagc
ctctacgcggaatacgatcgaccaaacctgcttccatttctccgagacagcatccattgc
ccccttgagaaggctcttgagatctgtcaacagagaaactttgtggaagagacagtttat
cttctgagccgcatggggaatagccgaagtgccctgaagatgatcatggaggaactgcac
gacgttgacaaagccattgaatttgccaaggagcaggacgacggggagctctgggaagac
ctgattttatattccatcgacaaaccaccgtttatcactggcttgctcaacaacattggc
acgcatgttgaccccattctcctgattcaccgcattaaggaaggaatggagattcccaat
ttgagagactccttggttaaaattctgcaagactacaacttacaaattctgcttcgtgaa
ggctgcaagaagattctcgtagctgactccctctccttactcaagaagatgcaccgaact
cagatgaaaggcgtcctggtcgacgaggagaacatctgtgagtcgtgcctgtcccctgtt
cttccgtcagacgcggcgaagcccttcagcgtggtggtcttccactgccggcacatgttc
cacaaggagtgcctgcccgcgcccagcctgaactcgcctgcacagttctgtaacatctgc
agcgccaagcaccggggcccaggcagcgccatcctggagatgaagaaatag
DBGET
integrated database retrieval system
