Vicugna pacos (alpaca): 102538383
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Entry
102538383 CDS
T08098
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102538383 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102538383 (EXOSC5)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102538383 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102538383
NCBI-ProteinID:
XP_006215046
UniProt:
A0A6I9IK25
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All DBs
Position
11
AA seq
235 aa
AA seq
DB search
MEGAMQNEAKICAESKTESGPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKTGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLMLDPTAKQEKEARAV
LTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQTASQHVFRFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcgatgcagaatgaagccaagatctgcgctgagtctaaaacagagtccggc
cctcggggccccggctgtagcctccggcactttgcctgcgaacagaacctgttgtcccgg
cctgatggctctgcctctttcctgcaaggggatacgtccgtcctggctggtgtgtacggg
ccagccgaggtgaaggtcagcaaagagatcttcaacaaggccaccctggaagtgatcctg
aggccgaagaccgggctgcctggcgtagcagagaagagccgagagcgactgatcagaaac
acgtgtgaagcagtggtgctgggagccttgcatccccgcacctccataactgtggtgctg
caggttgtcagtgatgctggctctctcctggcctgttgcctgaatgctgcctgcatggca
ttggtagacgctggggtacccatgcgggccctattctgtggggtcacctgtgctttggac
tctgatgggaccctcatgctggaccccacagcaaagcaggaaaaggaggcccgggcagtc
ctgacgtttgcacttgacagcgtggagcggaagctgctgatgtccaccaccaaggggctc
tactccgatgctgagctccagcagtgcctggcagcagcccagaccgcctcccagcacgtc
ttccgcttctaccgggaatcgctgcagaggcgttactccaagagctga
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