KEGG   Vicugna pacos (alpaca): 102538383
Entry
102538383         CDS       T08098                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102538383 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102538383 (EXOSC5)
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102538383 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 102538383
NCBI-ProteinID: XP_006215046
UniProt: A0A6I9IK25
LinkDB
Position
11
AA seq 235 aa
MEGAMQNEAKICAESKTESGPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKTGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLMLDPTAKQEKEARAV
LTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQTASQHVFRFYRESLQRRYSKS
NT seq 708 nt   +upstreamnt  +downstreamnt
atggagggggcgatgcagaatgaagccaagatctgcgctgagtctaaaacagagtccggc
cctcggggccccggctgtagcctccggcactttgcctgcgaacagaacctgttgtcccgg
cctgatggctctgcctctttcctgcaaggggatacgtccgtcctggctggtgtgtacggg
ccagccgaggtgaaggtcagcaaagagatcttcaacaaggccaccctggaagtgatcctg
aggccgaagaccgggctgcctggcgtagcagagaagagccgagagcgactgatcagaaac
acgtgtgaagcagtggtgctgggagccttgcatccccgcacctccataactgtggtgctg
caggttgtcagtgatgctggctctctcctggcctgttgcctgaatgctgcctgcatggca
ttggtagacgctggggtacccatgcgggccctattctgtggggtcacctgtgctttggac
tctgatgggaccctcatgctggaccccacagcaaagcaggaaaaggaggcccgggcagtc
ctgacgtttgcacttgacagcgtggagcggaagctgctgatgtccaccaccaaggggctc
tactccgatgctgagctccagcagtgcctggcagcagcccagaccgcctcccagcacgtc
ttccgcttctaccgggaatcgctgcagaggcgttactccaagagctga

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