Vicugna pacos (alpaca): 102538441
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Entry
102538441 CDS
T08098
Symbol
ZC3H12A
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102538441 (ZC3H12A)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102538441 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
Frey
Motif
Other DBs
NCBI-GeneID:
102538441
NCBI-ProteinID:
XP_006212738
UniProt:
A0A6I9IKF7
LinkDB
All DBs
Position
13
AA seq
549 aa
AA seq
DB search
MKVDFFRKLGYSSAEIHSVLQKLGVQADTNTVLGELVKHGSAAERERQVSPDPSPQLPLV
PRGGGTPKAPILEPSPPEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLE
RGHTDITVFVPSWRKEQPRPDMPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFI
VKLAFESDGIVVSNDTYRDLQSERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLD
NFLRKKPLTAEHRKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRPP
SKDRSGRRPSPSSQPGSLLTEREQRSLDGKKLGPRHPGNTGTGPPQTFAPTGRSLPPSGG
SGGSFGPSDWFSQTLDSLPYTSQECLDSGIGSLESQMSELWGVRGGSPGEPGPPRGPYAG
YRPYGAELPATPAFSAFGRAMGAGHFSVPADYAPPPAAYPPREYWSEPYQLPQPTPVLQE
PRVPGPGTDRGPWGGAGSLAKERASVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEIL
SYKSQHLSE
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgacttcttccggaagctgggctactcctctgctgagatccacagcgttcta
cagaagctgggggtccaggcggacaccaacacagtgctgggcgagctggtgaaacatggg
tcagcggcggagcgggagcgccaggtgtcaccagaccccagccctcagcttcctctggtg
ccccggggtggaggcacccccaaggctcccatcctggagccctcaccccccgaggaggac
aaggagggcagtgacctgaggcccgtggtcattgatgggagcaacgtggccatgagccac
ggaaacaaggaggtcttctcctgccggggtatcctgctggcggtgaactggtttctggag
cggggccacacagacatcacagtgtttgtaccatcctggaggaaggagcagcctcggcct
gacatgcccatcacagaccagcacatcctgcgggaactggagaagaaaaagatcctggtg
ttcaccccgtcgcggcgcgtgggtggcaagcgagtggtgtgctatgatgaccgcttcatc
gtgaagctggccttcgagtccgatggcatcgtggtgtccaatgacacttaccgggacctc
cagagcgagcggcaggagtggaagcgcttcatcgaggagcggcttctcatgtactccttc
gtcaatgacaagttcatgccccctgatgaccccttgggccggcacgggccgagcctggac
aacttcctgcgtaagaagccgctcacggcggagcacaggaagcagccgtgtccctatggg
aggaagtgcacctacggaatcaagtgccggttcttccacccggagcgaccgagccgcccc
cagcgctctgtagctgatgagctccgggccaacgccctcctctcaccgcccaggcccccg
agcaaggacagaagtggccggcggccttcaccttcatctcagcctggctctctgctgaca
gaacgtgagcagcgcagcctggacgggaagaagctggggcccaggcaccctgggaacacc
gggacgggtccgccacagaccttcgccccaacgggcaggagcctcccacctagtgggggc
agtggcggcagctttgggccctctgactggttctcgcagaccctggactccctcccatac
acctcccaggagtgcctggactcgggcatcggctccctggagagccagatgtcagaactg
tggggagttcgaggaggcagccctggtgagccaggcccacctcggggcccgtacgctggc
taccgtccctacggggccgagctcccagccactccggccttctctgcctttggccgggcc
atgggtgccggccactttagcgtccctgctgactatgcacccccgccagccgcctatcca
cctcgagagtactggtctgagccataccagttgccccaacccaccccagtcctgcaggag
cctcgggtgccgggcccagggactgacaggggcccctggggtggggcgggcagcctggcc
aaggagcgagccagcgtgtataccaagctgtgtggcgtcttccccccacacctggtggag
gccgtgatggggcgcttcccgcagctcctggacccccagcagctggccgccgagatcctc
tcctacaagtcccagcacctcagcgagtaa
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