Vicugna pacos (alpaca): 102538610
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Entry
102538610 CDS
T08098
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102538610 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102538610 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
vpc03310
]
102538610 (RORB)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102538610 (RORB)
Nuclear receptors [BR:
vpc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102538610 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
102538610
NCBI-ProteinID:
XP_031532985
UniProt:
A0A6J3AEY9
LinkDB
All DBs
Position
4
AA seq
440 aa
AA seq
DB search
MCENELKTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKQTQEVLLRIGYQCQHIQP
VKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSSISNGLGSLSSEAGG
TYANGHAIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFN
NGQLAAGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALW
QQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVL
FEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPR
KVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVN
TLFPPLYKELFNPDCATVCK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaacgagctcaaaaccaaagctgacgccactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataaatcctctgggatccactacggagtcatcacgtgtgaaggc
tgcaagcaaactcaagaagttctgctcagaatagggtatcagtgtcagcacattcaacct
gtgaagtttgggaggatgtccaagaagcaaagggacagcctgtacgccgaggtgcagaag
caccagcagcggctgcaggagcagcggcagcagcagagcggggaggcggaagccctcgcc
cgggtgtacagcagcagcatcagtaacggcctcggcagcctgagcagcgaggccggtggc
acttacgccaacggacacgccattgacctgcccaagtccgagggctattacagcgtggat
tccggccagccatcccctgaccagtcaggacttgacatgactggaatcaaacagataaag
caggaacccatctatgacctcacgtccgtacccaacctgtttacctatagctctttcaac
aacgggcagttagcagcagggataacgatgactgaaatcgatcgaattgcacagaacatc
atcaagtcccatttggagacttgtcagtacacgatggaggagctacaccagctggcatgg
cagacccacacctatgaagaaattaaagcctatcaaagcaagtccagggaagcactgtgg
cagcagtgtgccatccagatcactcacgccatccagtacgtggtagagttcgcaaagcgg
ataacaggcttcatggagctctgtcagaatgatcagatcctacttctgaagtcaggttgc
ttggaagtggttttagtgagaatgtgccgtgccttcaacccgttaaacaacactgttctg
tttgaaggaaaatatggaggaatgcagatgttcaaggccttaggttctgatgacctagtg
aatgaagcatttgactttgcaaagaatttgtgttccttgcagctaactgaggaagagatt
gctttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaagg
aaggtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaat
cacctggatgatgagaccttggcaaagttaatagccaagataccgaccatcacggcagtt
tgcaacttgcacggggagaagctgcaggtgtttaaacagtcacatccagacatagtgaat
acactctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaaa
tga
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