Vicugna pacos (alpaca): 102538611
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Entry
102538611 CDS
T08098
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102538611 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102538611 (RAD54B)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102538611 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
102538611
NCBI-ProteinID:
XP_006209749
UniProt:
A0A6I9ID03
LinkDB
All DBs
Position
25
AA seq
907 aa
AA seq
DB search
MRRSAAPSQLQGNPFKKPKFIPPARSNPSVNEEITKQNSDIKLLEVAASKNTFLQSQNDP
RICSFNLPTEESAREINHGDNYREKCLEASAMRTLDPHHTVHSSPKEITVSKGREEEPDS
LVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFTLKDLEGRDIGRGIGYKCKELEKTEEG
QTMMIGGKEIEVMGVISPDDFNSGRCFQVGGSSAVLSSSHTAKKCFSSPFKSVYKPSSKE
NSQNGFQNCKPRHDPYAPNSLVMLRPDNNHQWMFNRNCFPIVDVVVDPHLVYHLRPHQKE
GIIFLYECVMGMRVNGRYGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVT
PGSLVNNWRKEFQKWLGIERIKVFTVDQDHKVDEFAKSPFYSVLIISYEMLLRSLDQIKS
IKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGIL
GSLSSYRKIYEEPIIISRQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYLPPK
IENVVFCRPGALQTELYRKLLNSQAVRFCLQGLLENSSHLICIGALKKLCNHPCLLFSSV
KEKEHSSTWDENEERHLYEGLISVFPADYNPLTVTEEESGKLQVLSKLLAAVHELRPAEK
VVLVSNYTKTLDILQEVCKRYGYACTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKA
GGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQ
ISKQGLSGAVVDLTKTSEHIQFSVEELKNLFTLHENSHCVTHDLLDCECTGENHTGDSLE
KFPISRNCQLGPQQQKSNSLKPLSMSQLKQWKHFSGDQLNLTDPFLTRIRENVSFFFQNI
TNQTTSI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagacggtctgccgcaccaagtcagttgcaggggaatcccttcaaaaaaccaaaattt
ataccgccagcaagaagtaatccaagcgtgaacgaagagattacaaagcagaattcagat
ataaaattacttgaggttgctgcaagtaagaatacttttctccagtcacaaaatgatccc
agaatatgcagttttaatctgcctactgaagaaagtgctagagaaattaatcacggggac
aattacagggaaaaatgtttggaagcatctgcaatgagaacattagacccacatcataca
gttcattcatcccctaaagaaataacagtgtctaagggacgagaagaggaacctgatagc
ctagttaaatatttcagtgtcgtttggtgtaagccttcaaagaaaaaacacaaaaagtgg
gaaggtgatgctgttcttattgtaaaaggaaaatcgtttacactgaaggatttggaaggc
agagacattggaagaggcattggatataaatgcaaagagcttgaaaagactgaagagggt
caaacaatgatgattggtggaaaagaaatagaagtcatgggtgtaatctctccagatgat
ttcaacagtggcagatgctttcaagtcggaggaagttcggctgtcttaagttcttctcac
actgccaaaaaatgtttctctagccctttcaaaagtgtctataaaccaagttcaaaggaa
aatagtcagaacggtttccagaattgcaaaccacgccatgacccatatgcaccaaattcc
cttgttatgctacgaccagataataatcaccagtggatgttcaacaggaactgttttcct
attgtggatgtcgtggtagatcctcaccttgtgtatcaccttcgaccacatcagaaagaa
ggaatcatattcctctatgaatgtgtgatgggaatgagggtgaatggcagatatggagct
attcttgctgatgaaatgggtttagggaaaacactgcaatgtatttcgctcatctggacg
ctacagtgtcagggaccctatggtggcaagccagtaataaagaagacacttattgtcaca
cctggaagcttggtgaataactggaggaaagaatttcaaaaatggctaggaatagaaagg
atcaaggtatttactgttgatcaggaccacaaagtagatgaattcgccaaatctccattt
tattctgttcttatcatcagttatgaaatgttacttcgatccctggatcaaattaagagt
ataaaatttgatcttctaatttgtgatgaggggcatcgtttgaagaacagcgccattaag
acaactacagccctcattagcctctcttgtgagaaaagaataattctaactggtactcca
gttcagaatgatctccaagaattttttgcattaattgattttgtaaatccaggaatatta
ggctctttgtcatcttatagaaaaatatatgaagaacccatcattatatcaagacagcct
tctgcttctgaggaagaaaaggagctgggggagagaagggcagctgagcttacctgcctc
actgggctctttatccttagaagaacccaagaagtcataaacaagtatctcccaccgaaa
atagagaatgtagtcttttgccgaccaggagcactgcagaccgaactctatcgaaagctg
ttgaattctcaggctgtcagattctgtcttcaaggattgttggaaaatagttctcatcta
atatgcattggagcccttaagaaactgtgcaatcacccctgccttttgttcagctctgtg
aaggaaaaagaacatagctcaacttgggatgagaatgaagaaaggcatctatatgaaggc
ttgatcagtgtgttccctgctgattacaaccctctcacggttactgaggaggagtcagga
aaacttcaggtgctgtcaaagctcttggctgctgtccacgaacttcgtcctgctgaaaag
gtggtgttggtatccaactacacaaaaaccttggatattttacaagaagtatgcaagcgt
tatggatatgcttgtacaagacttgatggacaaacaccaatctctcaaaggcagcaaatt
gttgatggctttaatagtaaatactcttctgattttatttttttgttaagttcaaaagct
ggtggtgtgggacttaaccttattggagggtctcacttaattctctatgacattgattgg
aatccagccactgatatccaggcaatgtctagagtgtggagagatggtcagaaacatcct
gtacatatttacagactcctaaccacaggtacaatagaagaaaagatctatcaaagacag
atcagcaagcaaggtctttctggggcagttgtagacctaaccaagacatctgaacatatt
caattttcagtagaggaacttaaaaatttgtttacattacacgaaaattcacattgtgtt
actcatgacctgcttgactgcgaatgcacaggagaaaatcatacaggtgattcattggaa
aaattccctatctctagaaattgtcagcttggtccacaacaacagaagtctaactccctg
aaacctctctccatgtcacagctgaagcaatggaaacatttttctggagatcagttaaat
cttacagatccttttctcacaagaataagagaaaatgtgtcattcttttttcagaatata
accaatcaaactacttctatataa
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