Vicugna pacos (alpaca): 102538684
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Entry
102538684 CDS
T08098
Symbol
HPS1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102538684 (HPS1)
Membrane trafficking [BR:
vpc04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
102538684 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
102538684
NCBI-ProteinID:
XP_006210601
UniProt:
A0A6J3AVH5
LinkDB
All DBs
Position
11
AA seq
703 aa
AA seq
DB search
MKCVLVATEGAEVLFYWMDKEFEESLRLKFGQSECEGAGLPTLEDQLSTLLAPVIISSMT
MLEKLSDTYTCFSTENGNYLYVLHLFGECLFIAINGDRTEGEGDLRQKLCVLKYLFEVHF
GLVTVDGQIIRKELRPPDLEQRVQVWEHFQSLLWTYSHLREQEQCFAVEAVERLIHPQLC
KLCIEALERHVIQAINTSPKRAGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL
VQDLYPSESTAEDNDTQPSPRRPQSSQSIPVQQAWSSCSADPTRRSSAGTETDSFSPAEE
YFTPAPSPGEQSSGSTVWLEEGTPPTDASQVQVAEDTLQTLVPHSPGPSSPRRIFLDTSV
KENYCPMVPHTMYCLPLWPGINMVVLTKGPNTPLALVLYQLLDGFSLLEKKLKEGQEVGS
TLRSHPLMGDLRQRMDKFVKSRGGQELQSTWLEFKTKAFSRSEPGSSWELLQACRRVKRQ
LCTIYRLSFLAAAPGRGGPHLPQHLQDRVQTLMQEKLTDWKDFLLVKSRRNVTMVSYLED
FPGLVHFIYVDRTTGQMVAPSLSSSERTSSELGKGPLATFVRTKVWALIRLARRYLQKGY
TTLLFREGDFYCSYFLWFENEMGYKLQIIDVPVLSDDAAPVGMLGGDYYRKLLRYYSKGH
PAEAVRCHELLALHLSVIPVDVLVQQAGELARRLGEASHVPLL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgtcttggtggccacggagggcgcggaagtcctcttctactggatggacaag
gagtttgaagagagtctgcggctgaagtttgggcagtccgagtgtgagggagcagggctt
cccaccctggaggaccagctcagcaccctcctggcccccgtcatcatctcttccatgacg
atgctggagaagctctcagacacatacacctgcttctcaacggaaaatggcaattacctg
tatgtcctccacctgttcggagaatgcctgtttatcgccatcaatggagaccgcacagag
ggtgagggggacctgcggcagaagctatgtgtgctcaagtacctgtttgaggtgcacttc
gggctggttaccgtggatggccagatcattcgaaaagagctgcggcccccggacctggag
cagcgggtgcaggtttgggagcacttccagagcctgctgtggacctacagccacctgcgg
gagcaggagcagtgtttcgctgtggaggctgtggagcggctaatccaccctcagctctgc
aagctgtgcatagaggctctggagcggcatgtcatccaagccatcaacactagccctaag
cgggccggcgaggaggccctgcacgccttcctgctcgtgcactccaagctgctggccttc
tactccagccacagcgctagctccctgcgcccagccgacctcctcgccctcatccttctg
gttcaggacctataccccagcgagagcacagctgaggacaacgacacccagccctcccca
cgcaggccccagagcagccagagcatccccgtgcagcaggcctggagctcttgttctgca
gacccaaccaggaggagctctgcagggaccgagacagacagcttctcccccgctgaggag
tacttcacaccagctccttcccccggggagcagagttcaggtagcaccgtctggctggag
gagggcaccccacccactgatgcttcccaggtccaggtggctgaggacaccctccagacg
ctggtccctcactccccaggaccttccagccccagaaggattttcctagacaccagtgtg
aaggagaactactgccccatggtaccccacaccatgtactgcctgcctctttggccgggc
atcaacatggtggtcctgacaaagggtcccaacacgcccctggccctggtcctgtaccag
ctgctggatggattttccctcctggagaagaagctgaaggaggggcaggaggtggggagc
accctgcggtcccatcccctcatgggggacctgcgccagaggatggacaagttcgtcaag
agtcgaggtggacaagagcttcagagcacctggctggagttcaagaccaaggccttctcc
agaagtgagcccggatcgtcctgggagctgctccaggcttgcaggagggtgaagcggcag
ctctgcaccatctaccgtctgagcttcctggccgcggctccgggccggggaggcccccac
ctgccccagcacctgcaggaccgggtccagaccctcatgcaagaaaagctgaccgattgg
aaggacttcttgctggtgaagagcaggaggaacgtcaccatggtgtcctacctggaagac
ttcccaggcctggtgcatttcatctacgtggaccgcacaactggccagatggtggcccct
tccctcagcagcagtgagaggacctcatcggagctgggcaaggggcccctggccaccttc
gtcagaaccaaggtctgggctctgatccggctggcgcgcagatacctgcagaagggctac
accacgctgctgttccgggagggcgacttctactgctcctacttcctgtggttcgagaat
gagatgggctacaaactccagataattgatgtgcccgtcctgtctgacgacgcggctccc
gtgggcatgctgggaggagactactacaggaagctcctgcgctactacagcaaaggccac
ccggccgaggctgtcaggtgtcacgagctgctggccctccacctgtccgtcatccccgtg
gacgtgctggtgcagcaggccggggagctggcccgacgcctgggggaggcttcccatgtc
cccctgctctag
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