Vicugna pacos (alpaca): 102538739
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Entry
102538739 CDS
T08098
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X3
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc05014
Amyotrophic lateral sclerosis
vpc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102538739 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102538739 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102538739 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102538739 (NUP98)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102538739 (NUP98)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102538739 (NUP98)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102538739 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
102538739
NCBI-ProteinID:
XP_006203456
UniProt:
A0A6I9I7C6
LinkDB
All DBs
Position
10
AA seq
1799 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTATGLFGSSPATSSAAGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQTTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
GSTLFGNNKLTSFGTSTTSAPSFGTTSGGLFGFGTNTSGNSIFGSKPGPGTLGTGLGAGF
GTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPQASVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SEDLASPSDFPENGERFSFLSKPVDENHQQDGDDDSLVSRFYTNPIAKPIPQTPESAGNK
HNSSNNVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDREEIENTYNMHPAGIVLTK
VGYYTIPSMDDLAKITNDKGECIVSDFTIGRKGYGSIYFEGEVNLTNLNLDDIVHIRRKE
VIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQATPF
QMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDSMLEESVPEDQEPVSAST
HIASSLGINPHVLQIMKASLLADEEDVDMVMDQRFSRLPSKADTSQEICSPRLPISATHS
SKSRSLVGGLLQSKFTSGTFLSPSASLQECRTPRTPSLMNIPSTSPWSVPPPLTSVFTVP
SPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGE
QLCSSQELENHQIVESMEYGFLPNPVAVKSLTESPFKVHLEKLSLRQQKPDEDLQLYQTP
LELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWVKEASGDFLEAQIVKHWSLTWTLCEA
LWGHLKELDSQLDEPGEYIQILERRRAFSRWLSHTAAPQIEEEVSLTRKDNPVEAVFSYL
TGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADCFIQDERLRI
FALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISRALSMYEEAFQNTSE
GDRYACSPLPSYLEGSGYVVEEEQDSQRPLQDVCFHLLKLYSDRHYDLNQLLEPRSITAD
PLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAVFVLLHISNSSMR
EKAVREVLTRHCQLSETPESWAKETFLTQKLCVPAEWIHEAKAVRAHMECDKHLEALYLF
KAGHWNRCHKLVIQHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIR
VIEMLHHIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKRIANLLRVV
LSLQHAPDAPSDSTLDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcacaggtggttttggcacaact
tcaacatttggacagaatactggatttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggtctgtttggaaattcacagaccaaaccagga
ggattatttggtaccaattcatttagccagccagctacctccacaagcactggctttggg
tttggcacatcaacaggaacatcaaacagcttgtttggaactgcaagcacagggaccagt
cttttctcatcccaaaacaatgcctttgcacaaaataaaccaacaggttttgggaatttt
ggaacaagtactagcagtggaggactttttggaactacaaataccacctccaatcctttt
ggtagcacatctggctccctctttgggccaagtagttttacagctgctcctactgggact
accattaagtttaaccctccaactggtacagatactatggttaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaggaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcaggccaaccggaaaggcccgcagaaccaggtggga
gcaggtaccgcgactggcttatttgggtcttctcccgccacctccagtgcagcaggactc
ttcagctcttccaccacgaattcaggctttgcatatggtcagaacaaaacagcctttgga
actagtacaactggatttggaacaaatccaggtggtctctttggccaacaaaatcagcag
actaccagcctcttcagcaaaccatttggccaggccacaaccacccagaccactggcttt
tcctttggtaatactagcacactaggacagccaagcaccaacaccatgggtttatttgga
gttacccaagcctcacagccaggaggtctttttgggacagccacaaacaccagcacgggg
acagcatttggaacaggaacaggtctctttgggcagaccaatactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttacttcatttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttgggttcggcacaaataccagtgggaat
agtatttttggaagtaagccaggacctgggactctaggaactgggcttggtgcaggattt
ggaacagctcttggtgctggacaggcatctttgtttgggaacaaccaacctaagattgga
gggcctcttggtacaggagcctttggggcccctggatttaatactacgacagccactttg
ggctttggagccccccaggcctcagtagctttgacagatccaaatgcctctgctgcccag
caggctgttctccaacagcacatcaacagtctgacatattcaccttttggagactctcct
ctcttccggaatcccatgtcagaccctaagaagaaagaagagaggttgaaaccaacaaat
ccagcagcccaaaaggctctcacaacacctactcattataaactgacaccccgccctgcc
accagagtccgaccaaaggctttacaaacaacaggcacagccaagtcacatctctttgat
ggactggatgacgacgaaccatccttagccaatggagcattcatgcccaagaagagcatt
aagaagctggttttgaaaaaccttaataatagcaatctcttctctcctgttaatcgtgat
tcagaagatctagcttcaccgtctgattttccagaaaatggagagagattcagttttctg
agcaaaccagttgatgagaaccatcagcaggatggagatgatgattctcttgtgtcacgt
ttttatactaaccctattgccaaacccattcctcaaaccccagagagtgctggaaataaa
cataacagcagcaacaatgtggatgacaccattgttgcattaaacatgcgtgctgccttg
cgaaatgggctggaaggaagcagtgaagagacctcttttcatgaggagtcactgcaggat
gaccgagaagaaatagaaaatacttacaatatgcatccagcaggcattgttctcactaag
gttggttactatactattccatccatggatgaccttgctaaaattaccaatgataaagga
gagtgcatcgtctctgacttcactattggtcgtaaaggttatggttcaatctattttgaa
ggagaagtgaatttgacaaatctaaatttagatgatattgtgcatatccgaaggaaagaa
gtgattgtctatttagatgataaccaaaaaccacctgtgggtgaaggactaaataggaag
gctgaagttacattggatggagtttggccaacagataaaacatctcgatgtttaataaag
agcccagatcgacttgctgatatcaactatgagggaagattggaagcagtttcaaggaaa
caaggagctcagttcaaagagtaccgtcctgaaacaggttcttgggtgtttaaggtctcc
catttttctaagtatggccttcaggattctgatgaagaggaggaggaacggccatccaaa
actagtacaaagaagttgaagactgcccctttgcctcctgcaggccaggccaccccattc
cagatggctcttaatggcaaaccagcacctccaccccagagccagagcccagaggtggag
cagttagggagggttgtggaactggacagtgacatggtagatatcacccaggagccagtt
ttggattccatgttagaagagagcgtgcctgaggatcaggaacctgtgtccgcctcaaca
cacattgcatcttcactgggaattaatccacatgtcttacagatcatgaaagcatctttg
cttgctgatgaagaagatgtagatatggtcatggatcaacgcttcagtcgtcttccttct
aaagcagatacttctcaagaaatctgttctcccaggctccccatttcagcaactcactca
tcaaaatcccgttcactagtaggtgggttgctacaatcaaaatttacaagtggaactttt
ctttcaccaagtgcctctttacaagaatgtcgcactcccagaacaccatcactgatgaat
atcccatccacatccccttggtctgtccctccacccctgacctctgtgttcacagtgccc
agcccagcccctgaggttcagttgaaaacagtgggtacacgcaggcaaccaggcctagtc
cctcttgaaaagtctgtcacctatggaaaggggaaactcttgatggacatggccctgttt
atgggacgctcgtttcgggttggttggggccccaactggactctggctaatagtggagaa
cagctgtgcagctctcaggaactggaaaatcatcagattgttgagtctatggaatatgga
ttcctgcctaatccagtagctgttaaatccctaactgagtctccattcaaggttcatttg
gaaaaactcagtttgaggcaacagaagccagatgaagacctgcagttataccagacacct
ctggagcttaaattaaaacatagtactgtccatgtggatgagctgtgtcctctcattgtc
cccaatccgggagttgctgtcattcatgactatgcagattgggttaaagaagcatcagga
gactttttggaagcacaaattgtgaagcactggagcctaacatggacattatgtgaagct
ctgtggggccacttgaaggagcttgatagccagctggatgagcctggtgaatacattcag
attctggaacgaagaagagctttctctcgctggctgtcccatactgctgcacctcaaatt
gaggaggaagtctccttaacccgaaaagacaaccctgtggaggctgtcttcagctacctc
accgggaagaggatcagtgaggcctgctctctggcccagcagtcaggtgatcatcgtctt
gcccttcttttatcccagttggttggcagccagtcagtccgtgagctgcttactatgcag
ctggtggattggcatcagctccaggctgactgcttcatccaggatgagagactgcgcatc
tttgccctattggctggaaaaccggtatggcagctctcagagcagaagcaaatcaatgta
tgctctcagttggactggaaacgttccttggctgtccatctttggtatttgcttccccca
acagcctccatttccagggcactcagcatgtatgaagaagcatttcagaatacctctgaa
ggtgacagatatgcctgctccccacttccctcatacctggagggctctggctatgtggta
gaggaggagcaagactcacagagacctcttcaagacgtctgttttcaccttctaaaactc
tacagtgacagacattatgatctcaatcagctgttggagcctcgaagcataacagcagat
cctttggactaccgcctaagctggcacttgtgggaggtgctgcgggctcttaactacacc
catctctcagagcagtgtgagggtgtgctgcaggccagttatgctggccagctggaaagt
gaagggctctgggagtgggctgtctttgtcctcctgcacatcagcaactcaagcatgcgt
gagaaagctgttcgagaggtgcttacccggcactgccagctatcagagactcctgaatcc
tgggctaaggaaactttcctgacccagaagctttgtgtgcctgctgaatggattcatgag
gccaaagcagtgcgagcacacatggaatgtgacaaacatttggaggccctctatttattt
aaagcagggcactggaaccgctgccacaaactcgtcatccagcacttagcttctgatgcc
attattaatgagaactatgactacctgaaggggttcttggaagacctggcacctccagag
cgtagcagtctaatccaggactgggaaacatctgggcttgtttacctggactacattcga
gtcattgaaatgctccaccatatacagcaggtggattgctcaggttatgaactagagcag
ttacacaccaaagtgacttcactgtgcaaccggatagagcagatccagtgttacaatgcc
aaggatcgcttggcacaatcagatatggccaaacgtatagccaacctgttacgggtagta
ctgagtcttcagcatgcccctgatgcaccctccgactcaacgctggaccctcagcgagtc
cctttgcgcctattagctccccacattggccggctccccatgcctgaggactatgccttg
gaagaactgcgcagtctcacccagtcgtacctacgggaactgactgttgggagccagtga
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integrated database retrieval system
