Vicugna pacos (alpaca): 102538804
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Entry
102538804 CDS
T08098
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc03015
mRNA surveillance pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102538804 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
102538804 (EIF4A3)
03015 mRNA surveillance pathway
102538804 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102538804 (EIF4A3)
03041 Spliceosome [BR:
vpc03041
]
102538804 (EIF4A3)
03009 Ribosome biogenesis [BR:
vpc03009
]
102538804 (EIF4A3)
03012 Translation factors [BR:
vpc03012
]
102538804 (EIF4A3)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102538804 (EIF4A3)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102538804 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
102538804 (EIF4A3)
Spliceosome [BR:
vpc03041
]
Complex C
Other components
EJC/TREX
102538804 (EIF4A3)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
90S particles
Helicases
102538804 (EIF4A3)
Translation factors [BR:
vpc03012
]
Eukaryotic type
Initiation factors
eIF-4
102538804 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
102538804
NCBI-ProteinID:
XP_031541707
UniProt:
A0A6J3B8V9
LinkDB
All DBs
Position
16
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacggccacgatggcgacctcgggctcggcgcggaagcggctgctcaaagag
gaagatatgaccaaagtggaattcgagaccagcgaggaggtggacgtgacccccacgttc
gacaccatgggcctgcgggaggacctgctgcgcggcatctacgcttacggttttgaaaaa
ccatcagcaatccagcagcgagctattaagcagataattaaagggagagatgtcatcgca
cagtctcagtctggcacaggcaaaacggccaccttcagtatttctgtcctccagtgtttg
gacattcaggttcgtgaaacccaggcgttgatcttggctccaacgagagagttggcggtg
cagatccagaagggcctgctcgctctgggtgactacatgaacgtccagtgccacgcctgc
atcgggggcaccaacgtcggggaggacatcaggaagctggactacggccagcacgtcgtc
gccggcacgcccgggcgcgtctttgatatgattcgccgcagaagcttgaggacacgtgct
atcaagatgttggttttggatgaggctgatgaaatgctgaataaaggtttcaaagagcag
atctacgacgtgtacaggtacctgcccccagccacgcaggtggtgctcatcagcgccacg
ctgccgcatgagatcctggagatgaccaacaagttcatgactgaccccatccgcatcttg
gtgaaacgtgatgagttgactctagaaggcatcaagcagttttttgttgctgtggagaga
gaggagtggaagttcgacaccctgtgtgacctctatgacacgctgaccatcacccaggcc
gtcatcttctgtaacaccaagaggaaggttgactggctgacagagaagatgagggaagcc
aacttcaccgtgtcgtccatgcacggggacatgccccagaaggagcgggaatccatcatg
aaggagttccggtcaggtgccagccgcgtgctcatttccacggacgtgtgggcgcggggg
ctggacgtgccccaggtgtcgctcatcatcaactacgacctgcccaacaacagagagctg
tacatccacagaatcgggcgctcagggcgctacggccggaagggtgtggccatcaacttc
gtgaagaacgacgacatccgcatcctcagggacattgagcagtattactccacccagatc
gacgagatgcccatgaacgttgctgatctgatatga
DBGET
integrated database retrieval system
