Vicugna pacos (alpaca): 102539051
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Entry
102539051 CDS
T08098
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03040
Spliceosome
vpc05202
Transcriptional misregulation in cancer
vpc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102539051 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102539051 (DDX5)
05205 Proteoglycans in cancer
102539051 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102539051 (DDX5)
03009 Ribosome biogenesis [BR:
vpc03009
]
102539051 (DDX5)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102539051 (DDX5)
Spliceosome [BR:
vpc03041
]
Complex A
U1 snRNP components
U1 related factors
102539051 (DDX5)
Complex B
102539051 (DDX5)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
Pre-60S particles
Helicases
102539051 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
102539051
NCBI-ProteinID:
XP_006199381
UniProt:
A0A6I9I196
LinkDB
All DBs
Position
16
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttggaggaagtagggcagggcccttatcgggaaagaagtttggaaaccctggggagaaa
ctggttaaaaagaaatggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggctaggcgcacagcacaagaggtagagacatacagaagaagcaag
gaaattacggttagaggtcacaactgcccaaagccagttctgaatttttatgaagcgaac
tttcctgcaaatgtcatggacgtgattgcaaggcagaactttactgaacccactgctatt
caagctcagggatggccagttgctctaagtggattggatatggttggggtagcacaaact
ggatctggaaaaacgttgtcttatttgttgcctgccatcgtccatatcaatcatcagcca
ttcctagagaggggtgatggacctatttgcttggtgctggcaccaactcgggaactagcc
caacaggtacagcaagtagctgctgaatactgtagagcatgtcgcttgaagtctacttgc
atctatggtggtgctcccaagggaccacaaatacgtgatttggagagaggtgtggaaatt
tgtattgcaacacctggaagactgattgactttttagaatgtgggaaaaccaatctaagg
agaaccacctaccttgtccttgatgaagcagatagaatgcttgatatgggatttgaaccc
caaataaggaagattgtggatcaaataagacctgatagacaaaccctaatgtggagtgct
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactacattcatata
aacattggtgcactagaattgagtgcaaaccacaacattcttcagattgtggatgtgtgt
catgatgtagaaaaggatgaaaaacttattcgcctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgaacttactagaaag
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaaattgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatattctgcgggc
aaaaggggtggatttaatacatttagagacagggaaaattatgacagaggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaacgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacaggtacttatcagaatggttatgatagcactcagcagtatgggagtaat
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcacctatgattggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
