Vicugna pacos (alpaca): 102539072
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Entry
102539072 CDS
T08098
Symbol
CACNA1B
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04010
MAPK signaling pathway
vpc04020
Calcium signaling pathway
vpc04721
Synaptic vesicle cycle
vpc04723
Retrograde endocannabinoid signaling
vpc04725
Cholinergic synapse
vpc04726
Serotonergic synapse
vpc04727
GABAergic synapse
vpc04728
Dopaminergic synapse
vpc04930
Type II diabetes mellitus
vpc05016
Huntington disease
vpc05020
Prion disease
vpc05022
Pathways of neurodegeneration - multiple diseases
vpc05032
Morphine addiction
vpc05033
Nicotine addiction
vpc05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102539072 (CACNA1B)
04020 Calcium signaling pathway
102539072 (CACNA1B)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
102539072 (CACNA1B)
04725 Cholinergic synapse
102539072 (CACNA1B)
04728 Dopaminergic synapse
102539072 (CACNA1B)
04726 Serotonergic synapse
102539072 (CACNA1B)
04723 Retrograde endocannabinoid signaling
102539072 (CACNA1B)
04721 Synaptic vesicle cycle
102539072 (CACNA1B)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
102539072 (CACNA1B)
09164 Neurodegenerative disease
05016 Huntington disease
102539072 (CACNA1B)
05020 Prion disease
102539072 (CACNA1B)
05022 Pathways of neurodegeneration - multiple diseases
102539072 (CACNA1B)
09165 Substance dependence
05032 Morphine addiction
102539072 (CACNA1B)
05033 Nicotine addiction
102539072 (CACNA1B)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
102539072 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102539072 (CACNA1B)
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102539072 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
102539072
NCBI-ProteinID:
XP_031532918
UniProt:
A0A6J3AH81
LinkDB
All DBs
Position
4
AA seq
2381 aa
AA seq
DB search
MDNEGVREVSKDAYEVQTASQLRLLLLSPFHALSSRRPPRGLYAVCTSSLMMTASESGRS
GLRIRPFSAPPEAASAWLQHCALSALASWPLLFGASWPVLNPRTPFEYMILATIIANCIV
LALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVLHKGSYLRNGWNVMDF
VVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLF
FAILMFAIIGLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEGDTECREYWPGPN
FGITNFDNILFAVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLV
LGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKS
PLDVLKRAATKKSRNDLIHAEEGEDRFADLCAAGESPGSSWLCGACDCVYSVHPAPSCHQ
TSQPLGPPSPPSPLPTPSAAPSVCGCLSGAGPGGGGGCVYSPCKSPPARSCHTLCWLLLA
LWSPDVGVEPPGTSQGRGPCVSLMVGAATSLLSPVCRPRSRDLPPPRAWLPLRLVRWCKG
NPGLVSGRAFSVAFLSAWYQESRTRSSQAFPRPMPCHCGSAAKGTWCGRGRPWAVTAFTT
GASQGQPGPPCPPATWERVPSCLSLTRALSCPARFSGSVFAPVLASRFLAAVGFSSASLT
PLAGVWKPVRLSACRLSQSRELVGFKGHVGDVVCLRLLLDFAEFVFLGLFLTEMSLKVYG
LGPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSL
RNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILT
VFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANA
QELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQL
RLQNLRASCEALYSEMDPEERLRFATSRHLRPDMKTHLDLRNHQPKEPHCDLEASGVTGV
GPVQALPSTCLEKVEEQPEDADNQRNVTRMGSQPSDLSTTVHIPVTLTGPPGETTVVPSG
NVDLESQAEGKKEVGADDLMRSGPRPIVPHSSMFCLSPTNLLRRFCHYIVTMRYFEMVIL
VVIALSSIALAAEDPVQSDSPRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRD
LWNILDFIVVSGALVAFAFSXAPKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVV
NSLRNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYLDYEKDEVEA
QPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGYRMELSIFY
VVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQN
KQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNVVFTSMFSM
ECALKIVAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETNNFINLSFLRLFRAARLI
KLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDDTSINRHN
NFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDELANATECGSDFAYFYFVSFIFLCS
FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAARGRISYNDMFEMLKHM
SPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQ
CDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQIHQ
APGGLAQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSSASLSNGGAVQTQESGIKES
ISWGTQRTQEVPCEVRTPLERGHSTEIPVVQTGKPAVDVQMQSMALRGPDEEPQPGLESQ
GRAASMPRLAAETQPAPDASPMKRSISTLAPQRPHVAHLCNAALDRAPVGQAAPHHHHRC
HRRRDRKQKSLEKGPSLSADTDGAPSSTAGPGPPPGEGPASCRRERRQERGRSQERRQPS
SSSSEKQRFYSCDRFGGREPPQPKPSLSSHPTSPAAGQEPGPSRQGGGSVNGSPLLSTSG
ASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAGAQTSLPAFSPGRLSRGLSEHNAL
LQRDPLSQPLAPSSRIGSDPYLGQRLDSEAAARTQLEDTLTFEEAVATNSGRSSRTSYVS
SLTSQSHPLRRVPNGFHCTLGLSSGGRARHSYHHPSQDHWC
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgaaggtgtgagagaggtgtccaaggacgcatacgaagtgcagacagcctcc
cagctccggctcctcctcttgtctccttttcatgctctcagttctcgcaggccacccagg
ggcctctacgctgtctgcacttcctccctcatgatgacagcttcggagtcagggcggagt
gggctccggatacggccattctcggcccctccggaggcggcctcggcctggctgcagcac
tgcgcgctgtcggccttggcctcctggcctctcctcttcggagcctcctggcctgtcctt
aacccacgcactccgttcgagtacatgattctggccaccatcatcgccaactgtatcgta
ctggctctggagcagcacctccctgacggagacaagacgcccatgtctgagcggctggac
gacacggagccctatttcatcggcatcttctgcttcgaggctgggatcaagatcatcgcc
ctgggcttcgtgctgcacaagggctcctacctgcgcaacggctggaatgtcatggacttc
gtggtggtcctcacagggatccttgccacagctggcactgactttgacctgcggaccctg
cgggctgtgcgtgtgctgcggcccctgaagctggtgtctgggatcccaagtctgcaggtg
gtgctcaagtccatcatgaaggccatggtcccgctcctgcagatcgggctgctcctcttc
ttcgccatcctcatgttcgccatcattggcctcgagttctacatgggcaagttccacaag
gcctgcttccccaacagcacagatgcagagccagtgggcgacttcccctgtggcaaggag
gccccagcccggctgtgtgagggcgacactgagtgccgggagtactggccggggcccaac
tttggcatcaccaactttgacaacatcctgtttgccgtcttgacggtgttccagtgcatc
accatggagggctggaccgacatcctctacaacaccaacgacgcagccggcaacacctgg
aactggctttacttcatccccctcatcatcatcggctccttcttcatgctcaacctggtg
ctgggcgtgctctcaggagagttcgccaaggagcgggagcgggtggagaaccgccgggcc
ttcctgaagcttcgccggcagcagcagattgaacgggagctgaacgggtacctggagtgg
atcttcaaggctgaggaagtcatgctggccgaggaggacaagaatgcagaggagaagtcc
ccgctggacgtgctgaagagggcggccaccaagaagagccgaaacgacctgatccacgcg
gaggagggggaggaccggtttgcagacctctgtgctgcaggtgagtctcccgggtcctcc
tggctctgcggggcctgcgactgtgtgtacagtgtgcaccctgctccctcctgtcaccag
acttcccagcccctggggccaccctcccctccgtccccactgcccaccccaagtgccgct
ccctccgtgtgcgggtgtctttctggggctggccctggcgggggggggggctgtgtgtac
agcccctgcaagtcccctcctgctcgttcgtgtcatacgctttgctggctgctcttggct
ctgtggtcccccgacgtgggtgtggagcccccaggcacgtcccaaggccgagggccgtgt
gtgtcactgatggtaggggctgccacctcgcttctaagccccgtgtgccgtccacgttcc
cgggacctgccgcctccgagggcttggcttcctctccgacttgtcagatggtgcaaggga
aacccgggtcttgtatcaggcagagccttttcggttgccttcctctcagcctggtaccaa
gagtctagaaccagaagttcccaggcctttccccgcccaatgccctgtcattgtggctcc
gcggcaaaagggacctggtgtgggaggggccggccctgggcagtgacagcgttcaccacc
ggtgccagtcagggccagccaggacccccttgtccccccgccacgtgggagcgggtgccc
tcctgcctctcgctgaccagggcgctcagctgccctgcccgcttctctggttctgtgttc
gcccctgtcctggcctctcgtttcctggccgccgttggcttctcttccgcgtcactaacc
ccccttgctggggtctggaaaccggtgcgcctgtcggcctgcaggctcagtcagagccgg
gagctggtgggcttcaagggccacgtgggggatgtggtttgtctccggcttctcctagac
tttgcagagtttgttttcctgggtctcttcctcacagagatgtccctgaaggtgtacggc
ctggggcccaggagctacttccggtcctccttcaactgcttcgacttcggggtcattgtg
gggagcatcttcgaggtggtctgggcggccatcaagccgggaacctccttcgggatcagt
gtgctgcgggctctccggctgctgaggatcttcaaagtcaccaagtactggagctcgctg
cggaacctggtggtgtccctgctcaactccatgaagtccatcatcagcctgctcttcctg
ctcttcctcttcatcgtggtcttcgccctgctgggcatgcagctgttcgggggacagttc
aactttcaagacgagactccaacgaccaacttcgacaccttccctgctgccatcctcacc
gtcttccagatcctgaccggagaggactggaacgcagtgatgtaccacgggatcgaatcg
caaggtggggtcagcaaaggcatgttttcgtccttctacttcatcgtcctgacgctgttt
ggaaactacaccctgctgaacgtctttctggccattgcggtggacaacctcgccaatgcg
caggagctgaccaaggatgaggaggagatggaagaagcagccaatcagaagctggctctg
caaaaggccaaagaggtggccgaagtcagccccatgtctgccgcgaacatctccatcgcc
gccaggcagcagaactcggccaaggcgcgctccgtgtgggagcagcgggccagccagctg
cggctgcagaacctgcgggccagctgcgaggcgctgtacagcgagatggaccctgaggag
cggctgcgcttcgccacctcccgccacctgcggcccgacatgaagacgcacctggacctc
cggaaccaccagcccaaggagcctcactgtgacttggaggccagtggggtcacgggtgtg
ggccctgtgcaggcactgcccagcacctgtctagagaaggtggaagaacagccagaggat
gcagataatcagcgaaatgtcactcggatgggcagtcaaccctcggatctgagcaccact
gtacatatcccagtaacgctgaccggcccccccggggagaccacggttgttcccagtggt
aatgtggacctggagagccaagcggaagggaagaaggaggtgggcgctgacgacctgatg
aggagtggcccccgccccatcgtcccacacagctccatgttctgcttaagccccaccaac
ctgctccgccgcttctgccattacattgtgaccatgcggtacttcgagatggtcattctc
gtggtcatcgccttgagcagcatcgccctggcggctgaggaccccgtgcagtcagactcg
cccaggaacaacgctctgaagtacatggactacatcttcacaggcgtcttcacctttgag
atggtgataaagatgatcgacctgggactgctgctgcaccctggcgcctacttccgggac
ctgtggaatatcctggacttcattgtggtcagtggggccctggtggcctttgccttctcg
taagctccaaagggaaaagacatcaacaccatcaagtccctgagggtcctgcgtgtgctg
cggccgctcaagaccatcaagcggctgcccaagctcaaggcggtgttcgactgcgtggtg
aactccctgaggaacgtcctcaacatcctcatcgtctacatgctcttcatgttcatcttc
gctgtcatcgcagtgcagctcttcaaggggaagttcttctactgcacggacgagtccaag
gagctggaacgggactgcaggggccagtatctggactacgagaaggacgaagtggaagct
cagccccggcagtggaagaaatacgacttccactacgacaatgtgctctgggccctgctg
actctgttcacggtgtccacgggggaaggctggcccatggtgctgaagcactcggtggat
gccacctacgaggagcagggcccgagccccgggtaccgcatggagctgtccatcttctac
gtggtctatttcgtggtcttccccttcttctttgtcaacatctttgtggccttgatcatc
atcaccttccaggagcagggggacaaggtgatgtctgagtgcagcctggagaagaacgag
agggcttgcatcgactttgccatcagcgccaaacccctgacacggtacatgcctcagaac
aagcagtctttccagtacaagacgtggacgttcgtggtctcgccgccctttgaatacttc
atcatggccatgatcgccctcaacacggtggtgctgatgatgaagttctacgacgcgccc
tacgagtacgagctgatgctgaagtgcctgaacgtggtgttcacgtccatgttctccatg
gagtgcgccctgaagatcgtcgcctttggggtgctgaactatttcagagatgcctggaat
gtctttgactttgtcactgtgttgggaagtattactgatattttagtaacagagattgcg
gaaacgaacaacttcatcaacctcagcttcctccgcctgttccgtgccgcccggctcatc
aagctgctccggcagggctacaccatccgcatcctgctgtggaccttcgtccagtccttc
aaggccctgccctacgtgtgcctgctcattgccatgctgttcttcatctacgccatcatt
ggcatgcaggtgtttggaaacatcgccctggatgacgacaccagcatcaaccggcacaac
aacttccggacgtttctgcaggccctgatgctgctgttcaggagtgccacgggggaggcc
tggcacgagatcatgctgtcctgtctcagcaaccgggcctgcgatgagctcgccaatgcc
actgagtgtgggagtgactttgcctacttctactttgtctccttcatcttcctctgctcc
tttctgatgttgaacctctttgtggccgtcatcatggacaacttcgagtaccttacgcgg
gactcctccatcctggggccgcaccacctggacgagttcatccgcgtctgggctgagtac
gacccggctgcccgtgggcgcatcagttacaatgacatgtttgagatgctgaaacacatg
tccccgcccctggggctggggaagaaatgccctgctcgagttgcatacaagcgcctggtt
cgtatgaacatgcccatctccaatgaggacatgaccgtccacttcacgtccacgttgatg
gccctgatccggacagcgctggagatcaagctggctccagctggcacgaagcagcaccag
tgtgacgcagagttgaggaaggagatttcttctgtgtgggccaatctgccccagaagacc
ctggatttactggtgcctccccataaacctgacgagatgacagtggggaaggtgtacgca
gctctgatgatattcgacttctacaaacagaacaaaaccacccgggaccagattcaccaa
gctccaggaggcctggcccagatgggccctgtgtccctgttccaccctctgaaggccacg
ctggagcagacacagccagccgtgctccgtggagcccgtgttttcctgcggcagaagagc
tcggcctccctcagcaacggtggggcggtacaaacccaagagagtggcatcaaggagtct
atttcctggggcacccagaggacccaggaggtgccctgcgaggtgaggacacctctggag
cgaggccactctacggagatcccggtggtgcagacaggaaagccggctgtggatgtccag
atgcagagcatggccctgagaggtcctgacgaggagccccaacccgggctggagagccag
ggccgagcagcctccatgccccgcctggcagcagagactcagcctgccccagacgccagc
cccatgaagcgctccatctccactctggcgccccagcgcccccacgtggctcatctctgc
aacgccgccctggaccgcgctccggtcggccaggccgccccccaccaccaccaccgctgc
catcgccgcagggacaggaagcagaagtccctggagaaggggcccagcctgtccgccgac
acggatggcgcacccagcagcactgcggggccggggccgcccccaggagaggggcctgca
agctgtcggcgggagcgcaggcaggagcggggccggtcccaggagcggaggcagccctcc
tcctcctcctctgagaagcagcgcttctactcctgcgaccgctttgggggccgtgagccc
ccacagcccaagccctccctcagtagccaccctacatcgccagcggccgggcaggagcca
ggaccctcgagacagggtggtggttcggtgaacgggagccccctgctgtcaacatctggt
gctagcacccctggccgaggtgggcggaggcagctcccccagaccccgctgaccccccga
cccagcatcacatataagacggccaactcgtcgcccgtccactttgccggggctcagacc
agcctccctgccttctcccccggccggcttagccgcggcctttcggaacacaacgctctg
ctccagagagaccccctcagccagcccctggcccccagctctcggatcggctccgacccc
tacctggggcagcgtctggacagcgaggctgccgcccgcacccagctggaggacacgctc
acctttgaggaggctgtggccaccaactcaggccgttcctcccggacttcctacgtgtcc
tccctgacctcccagtcccaccccctccgccgtgtgcccaacggcttccactgcactctg
ggcctcagctcgggtggccgggcgcggcacagctaccaccaccccagccaagaccactgg
tgctag
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integrated database retrieval system
