Vicugna pacos (alpaca): 102539102
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Entry
102539102 CDS
T08098
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X4
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102539102 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102539102 (HNRNPM)
Spliceosome [BR:
vpc03041
]
Common components
Common spliceosomal components
hnRNP proteins
102539102 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_occluded
Collagen_mid
RBD_DEAH11
RRM_5
PhageMin_Tail
Motif
Other DBs
NCBI-GeneID:
102539102
NCBI-ProteinID:
XP_006206379
UniProt:
A0A6I9I8K4
LinkDB
All DBs
Position
22
AA seq
730 aa
AA seq
DB search
MAAGVEAAAEVAATEPKMEEESGAPGVPSGNGAPGPKGEGERPAQNEKRKEKNIKRGGNR
FEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGIGFGINKMGGMEGPFGGGMENM
GRFGSGMNMGRINEILSNALKRGEIIAKQGGGGGGGSVPGIERMGPGIDRIGGAGMERMG
AGLGHGMDRVGSEIERMGLVMDRMGSVERMGSGIERMGPLGLDHMASSIERMGQTMERIG
SGVERMGAGMGFGLERMAAPIDRVGQTIERMGSGVERMGPAIERMGLSMERMVPAGMGAG
LERMGPVMDRMATGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPAL
GAGIERMGLAMGGGGGASFDRAIEMERGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNL
PFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGR
EIDVRIDRNA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcggcggccgaggtggcggcgactgagcccaaaatggaggag
gagagcggcgcgcccggcgtgccgagcggcaacggagctccaggcccaaagggtgaagga
gaacgacctgctcagaatgagaagaggaaggagaaaaacataaaaagaggaggcaatcgc
tttgagccatatgccaatccaactaaaagatacagagccttcattacaaacatacctttt
gatgtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatac
gtggagctcttaatggacgctgaaggaaagtcaaggggatgtgctgttgttgaattcaag
atggaagagagcatgaaaaaagctgctgaagttctaaacaagcatagtctgagtggaaga
ccactgaaagtcaaagaagatcctgatggtgaacatgccaggagagcaatgcaaaaggtg
atggctacgactggtgggatgggtatgggaccaggtggcccaggaatgattaatatccca
cccagtatcctaaataatcctaacatcccaaatgagattatccatgcattacaggctgga
agacttggaagcacagtatttgtagcaaatctggattataaagttggctggaagaaactg
aaggaagtttttagtatggctggtgtggtggtccgagcagacattcttgaggataaagat
ggaaaaagtcgtggaataggcactgttacttttgaacagtccattgaagctgtacaagct
atatctatgtttaatgggcaactgctatttgacagaccaatgcatgtgaaaatggatgag
agggccttaccaaaaggagattttttccctcctgagcgtccacagcaacttccccatgga
cttggtggtattggcatggggttaggaccaggagggcagcctattgatgccaatcatttg
aataaaggcattggaatgggaaacatagggcccgcaggaatgggaatggaaggcatagga
tttggaataaataaaatgggaggcatggagggaccctttggtggtggtatggaaaacatg
ggtcgatttggatctgggatgaacatgggcagaataaatgaaatcctaagtaatgcactg
aagagaggagagatcattgcaaagcagggaggaggtggaggcgggggcagtgtccctgga
atcgagaggatgggccctggcattgaccgcattgggggtgccggcatggagcgcatgggc
gcaggcctgggccacggaatggatcgtgtgggctccgagattgagcgcatgggcctggtc
atggaccgcatgggctcagtcgagcgcatgggctctggcatcgagcgcatgggcccactg
ggccttgaccacatggcctccagcatcgagcgcatgggccagaccatggagcgcatcggc
tccggtgtggagcgcatgggtgccggcatgggctttggcctcgagcgtatggccgcaccc
attgaccgcgtgggccagaccattgagcgcatgggctctggtgtggagcgtatgggccct
gccatcgagcgcatgggcctgagcatggagcgcatggtgcccgcaggcatgggggcaggc
ctggagcgcatgggccccgtgatggatcgcatggccaccggcctggagcgcatgggcgcc
aacaacctggagcgcatgggcctggagcgaatgggcgccaacagcctggagcgcatgggc
ctggagcgcatgggcgccaacagcctggagcgcatgggtcccgccatgggccctgccctg
ggcgctggcattgagcgcatgggcctggccatgggtggcggtggcggtgccagctttgac
cgcgccatcgagatggagcgtggcaacttcggaggaagcttcgcaggttcctttggtgga
gccggaggccatgctcctggggtggccagaaaggcctgccagatatttgtgagaaatctc
ccatttgattttacatggaagatgctaaaagacaaattcaacgaatgtggccacgtgctg
tatgctgacatcaagatggagaatgggaagtccaaggggtgcggtgtggttaagtttgag
tcgccagaggtggctgagagagcctgccggatgatgaatgggatgaagctgagtggccga
gagattgatgttcgaatcgatagaaatgcttaa
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