Vicugna pacos (alpaca): 102539105
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Entry
102539105 CDS
T08098
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X2
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04140
Autophagy - animal
vpc04148
Efferocytosis
vpc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102539105 (VPS16)
04148 Efferocytosis
102539105 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102539105 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102539105 (VPS16)
Membrane trafficking [BR:
vpc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102539105 (VPS16)
Hops complex
102539105 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
102539105
NCBI-ProteinID:
XP_006207385
UniProt:
A0ABM5BUF1
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLQEELRDCLVAAASYGGPIALLRNPWKKEKAA
SIRPVLEIYSASGVPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCQDRVAHILLAVGPDLYLLDHAACSAVTLPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGQNKRAEQLARDFR
IPDKRLWWLKLTALAHLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAEMSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacactgcaaactggaacccgctcggggactcggccttttaccggaagtat
gagctgtacagcatggactgggacctacaggaggagctgagggactgcctggtggctgct
gcgtcctatgggggccccattgcactgctgaggaacccctggaagaaggagaaggctgcc
agcataaggccggttctcgagatctactcagcttccggcgtgcctctggccagtctgctg
tggaagagtgggcccgtggtgtcactgggctggtcggccgaggaggagctgctctgcgtt
caggaagatggtgtggtgctggtttatggtctccatggtgacttccggagacacttcagc
atgggcaacgaggtgctccagaaccgggtcctagatgcccggatcttccatactgagttt
ggttctggggtggccatcctcacaggggcccaccgcttcaccctcagtgccaacgtgggg
gacctcaaactccgccggatgccagaggtgccaggtctgcagagtgcaccgtcatgctgg
accacgctgtgccaggaccgagtggcacacattcttctggctgtaggacctgatctttac
ctcctggaccacgcagcctgctctgcagtgaccctccctggcctagccccaggagtgagc
agcttcctgcagatggctgtctccttcacctaccgacacctggcactcttcacagacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccgaagcagatggtctggtgcagccgtcctcgcagcaaggaaagggct
gtcgtggtggcctgggagaggcggctaatggtggtgggtgatgcacctgagagcatccag
tttgtgttggatgaagactcctacctggtgcctgagctggatggggtccgcatcttctcc
cgcagtacccacgagttcctgcacgaggttccagtggccagcgaggagatctttaaaatt
gcctcgatggcccctggagcgctgctgttggaggcccagaaggaatatgagaaagagagc
cagaaggctgatgagtacctgcgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggccgcaggacacgagcactggccagacatgcagaagagtctgctc
agggcggcctcgtttggaaagtgtttcctcgacagatttccaccagacagcttcgtgcgc
atgtgtcaggacctacgtgtgctcaatgctgttcgagactatcacatcgggatccccctc
acctatagccaatacaagcagctcaccatccaggtgctgctggacaggcttgtgttgcgg
aggctttatcctctggccattcagatatgtgagtacctgcggcttcctgaagtgcagggc
gtcagcaggatcctggcccactgggcctgctataaggtacagcagaaagacgtgtctgac
gaggatgttgcgcgggccattaaccagaagctgggggacacgcctggcgtgtcttactca
gacattgccgcacgagcctatggctgtggccgcacggaactggccatcaagctgctggag
tatgagccacgctccggggagcaggtaccccttctgctaaagatgaagaggagcaaactg
gcactaagcaaggccatcgagagtggggacaccgacctggtgttcacggtgctgctgcac
ctgaagaatgagctgaatcgaggagattttttcatgacgcttcggaaccagcccatggcc
ctgagtctgtaccgacagttctgtaagcatcaggagctggagacgctgaaggacctttac
aatcaggatgacaaccatcaggagctgggcagcttccacatccgagccagctacgctgca
gaggagcgcattgaggggcgagtcgcagctctgcagacagcagccgacgccttctacaag
gccaagaatgagtttgcagccaaggccacagaggatcaaatgcggctcctacggctgcag
cgacgcctagaagacgagctggggggccagttcttagacctgtctctacatgacacggtc
accaccctcatccttggcggccagaacaagcgcgcggagcagctggcgcgtgacttccgc
atccctgacaagaggctctggtggctgaaactgaccgccctggcacatctggaagactgg
gaagagctagagaagttttctaagagcaagaaatcacccatcggctacctgccctttgtg
gaaatctgcatgaagcaacacaacaaatacgaggccaagaagtatgcctcccgtgtgggt
cctgagcagaaggtcaaggcattgcttctcgttggggatgtggctcaggctgcagacgtg
gccattgagcaccggaacgaggcagagatgagcctcgtattgtcccactgcaccggagcc
acggacggggccacagccgacaagattcagcgggcccgggcacaggcccaaaagaagtaa
DBGET
integrated database retrieval system
