Vicugna pacos (alpaca): 102539367
Help
Entry
102539367 CDS
T08098
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102539367 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102539367 (TAF5L)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102539367 (TAF5L)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102539367 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
102539367 (TAF5L)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102539367 (TAF5L)
STAGA complex
102539367 (TAF5L)
TFTC complex
102539367 (TAF5L)
SAGA complex
102539367 (TAF5L)
SLIK complex
102539367 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
RMC1_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD40_like
eIF2A
Ge1_WD40
WD_LRWD1
Nbas_N
Beta-prop_IP5PC_F
Mala_s_1-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
102539367
NCBI-ProteinID:
XP_015101711
UniProt:
A0A6J0AUI0
LinkDB
All DBs
Position
11
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSAEEMATNLAVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDHKYVVRLQEDSYNYLLRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSEGNGLEPADVPTPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDSAGTEMKVLRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
SAHCSAPADGSSSELVGVYTGQTSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcaccgagcagattcagatggccgtgtcctgctacctcaagcgccgg
cagtacggggacgcggacggcccgctgaagcaaggcctgcggctgtcacagagcgccgag
gagatggccaccaacctcgcagtccaatcagagtctggttgtgccaacatagtgtctgcg
gccccctgccaggcagagccccagcagtatgaagtacagttcggacggctgcggaacttc
ctcaccgattctgactcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccacctcaacctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccacggcatgtttctgcagaacgcgagccagaaggatgtcatcgagcagctg
cagaccactcagaccatccaggacatcctgtccaacttccggctgcgggcgttcctggac
cacaagtacgtggtccgcctccaggaagacagctacaactaccttctccgctacctccag
agtgacaacaacaccgccctgtgcaaagtcctcaccttgcacatccacctggacgtgcag
cctgccaagaggacagactaccagctctacgccagcggcagctcctcccgaagcgagggc
aacggcctggagcccgccgacgtgcccaccccgattctgcagaacgaggctgccctggag
gtcctgcaggagagcattaagcgcgtcaaggacggccccccctccctcaccaccatctgt
ttctatgccttctataacacggagcagctgctgaacactgcagaaatctccccggatagc
aagctgctcgctgccgggtttgacaactcctgtatcaaactgtggagtttacgatccaag
aagttaaaatcagaaccccatcaagtggacgtgtcccgcatccacttggcttgtgatatt
ctggaggaggaggacgatgaggacgacagcgcgggcacggagatgaaggtcctgcggggc
cactgcgggccagtgtacagcaccaggttcctcgcagacagctcagggttgctctcttgc
tctgaagacatgtccatcaggtactgggacctcgggagtttcaccaacactgtgctgtac
cagggccacgcctaccccgtgtgggacctggacatcagcccgcacagcctgtacttcgcc
agtgggtcccacgaccgcacggccaggctctggtcgtttgatcggacgtacccgctgaga
atctatgccggacacctggccgacgtggactgtgtcaagttccaccctaactccaactac
ttagccacgggctcgaccgacaagacggtccggctgtggagcgcccagcaggggaactcg
gtgaggctcttcacgggccaccgcggccccgtgctgtctctggccttctctcccaacggt
aagtacctggcatcggccggcgaggaccagcggttgaagctgtgggacttggcctcgggg
accctgtacaaagagctgcgaggccacacggacaacatcaccagcctcaccttcagcccg
gacagcagtctgatcgcctcggcgtccatggacaactcggtgcgcgtctgggacatcagg
agcgcccactgcagcgcgcccgccgacggctcgtccagcgagctggtgggcgtctacacc
ggccagacgagcaacgtgctcagcgtgcagttcatggcctgcaacctccttctggtgact
ggaatcacgcaagagaatcaggagcattga
DBGET
integrated database retrieval system
