Vicugna pacos (alpaca): 102539815 Help Entry 102539815         CDS       T08098                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X6   KO K12879   THO complex subunit 2 Organism vpc  Vicugna pacos (alpaca) Pathway vpc03013   Nucleocytoplasmic transport vpc03040   Spliceosome Brite KEGG Orthology (KO) [BR:vpc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102539815 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     102539815 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vpc03019]     102539815 (THOC2)    03041 Spliceosome [BR:vpc03041]     102539815 (THOC2) Messenger RNA biogenesis [BR:vpc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      102539815 (THOC2) Spliceosome [BR:vpc03041]  Complex C   Other components    EJC/TREX     102539815 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     102539815 (THOC2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  102539815 NCBI-ProteinID:  XP_006204040 UniProt:  A0A6I9I8G3 LinkDB All DBs Position X AA seq 1594 aa AA seqDB search MAAATVVLPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK REIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAIASV QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNGNSGS NSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER TPKSDKEKEKFKKEEKAKDEKFKTTVPNAESKSTQEKEREKEPSRERDIAKEMKSKENVK GGEKTPVSGSLKSPVPRSDIAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRR KEENGTMGISKHKSESPCESPYANEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKE SRHDKEKIEKKEKRDSSGGKEEKKQYPFHLIVFN NT seq 4785 nt NT seq  +upstreamnt  +downstreamnt atggcggccgcaactgtggtgcttcccgtagagtggataaagaactgggagaaatcaggg agaggcgaatttttacatttatgccgaatcctcagtgaaaataaaagccatgatagttca acttatagagatttccagcaagctctttatgagttatcataccatgtcattaaaggaaat ctaaagcatgaacaggcgtctaatgttcttaatgacattagtgagtttcgtgaggatatg ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac acagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa tcacagcaattcaatcaaaaatcagttaaaatcaagacaaaactcttttataaacagcaa aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg caagatttatctggaaatattactagtgatttaattttagaaaatatcaaatctttaata ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc aggccggaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga gagactccttcatctttatacagagttgcagcagtacttctacagtttaatcttattgat ttagatgatctatatgtacatcttctaccagctgataattgtattatggatgaacacaaa cgagaaattgtggaagctaagcaaattgttagaaaacttacaatggttgtattgtcttct gataaaattgacgaacgagagaaagaaaaggaaaaagaagaggagaaagtggagaagcca cctgacaaccaaaaacttggtttgttggaagccttgctaaagattggtgattggcagcat gcacagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagct cttgctatttgcaagcttattcatataactattgagcctctctatcgaagagttggcgtt cctaaaggtgctaaaggctcacctgttaatgctttacaaaataagagagcaccaaaacaa gcagaaagctttgaagatttgaggagagatgtcttcaatatgttctgttacctgggtcct cacctttctcatgatcccattttattcgcgaaagtggtgcgcataggcaagtcatttatg aaggagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc aatgcttgtatgtctgaggaactgtggggaatgtttaaaacatttccatatcagcataga tatcgcctgtatggccagtggaagaatgaaacttacaacagtcacccacttttagtaaaa gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca ttaaaatacctcacatcgttgaattatgatgtcttggcctattgtatcattgaagcttta gctaatccagaaaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcag agtctggctagtttctgtggtgcagtttttcgtaaatacccaattgatcttgctggtctt cttcaatatgtggctaatcagctaaaggcaggcaaaagttttgaccttcttatattgaaa gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaactg gaggccatgactggtggagagcaactaaaagctgagggtggttattttggccagatcaga aacactaaaaagtcctcccagagattaaaggatgcactattagaccatgaccttgctctt cctctctgtttgcttatggctcaacagaggaatggggtaatctttcaggaaggtggagag aaacatttgaaacttgtgggaaagctctatgatcagtgtcatgataccctggtacagttt ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcgatt gatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttcttgtctaggcca atgtatgcacaccatatttcgtcaaagtatgatgaacttaaaaaatcagagaagggaagt aaacagcaacataaagttcataagtacattacatcatgtgaaatggtgatggctcctgtc catgaagcggtggtttccttacatgtttccaaggtctgggatgacatcagccctcagttc tatgccacgttctggtcattgacaatgtatgaccttgcagttccgcataccagctatgaa cgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct ccaaataaaaagaaaaaagagaaggagcggtgtactgcccttcaggataagcttcttgaa gaagaaaagaaacagatggagcatgtacagcgagttctacagagactgaaactggaaaag gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt ttctctgatataatttacacagtcgcaagctgtactgaaaatgaagctagtcgatacggg agattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatat gaaaaggaatgtggaaattatccaggattccttactatattacgggcaactggatttgat ggtggaaataaagctgatcagttagactatgaaaattttcgacatgttgtacataaatgg cattacaaactaaccaaggcatcggtacattgccttgaaacaggcgaatatactcacatc aggaatatcttgattgtattaacaaaaatacttccttggtacccaaaagttttgaatctg ggtcaggctttggaaagaagagtgcataaaatctgccaagaggagaaagagaagaggcca gatctatatgcattggctatgggctactctgggcagttgaaaagtaggaagtcatacatg attcctgaaaatgagtttcatcacaaagaccctcctccgaggaatgcaattgccagtgta caaaatgggcctggcggtgggccttcatcatcatcgataggaagtgcatctaaatcggat gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct gttaataaagcttctagcgccacaccgaaagggaattcaagcaatggaaatagtggctct aacagcagcaaagctgttaaagagaatgacaaagaaaaagggaaagagaaagaaaaagag aaaaaagaaaagactccagctactactccagaggccagagtacttggtaaagatggtaaa gaaaaaccgaaggaagaacggccaaataaagatgaaaaagcaagagagacgaaggaaaga acacctaaatctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgag aaattcaagaccactgtgcccaatgcagaatcaaagtcgactcaagaaaaggaaagagag aaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaaaatgttaaa ggaggagagaaaacaccagtttctgggtccttgaagtcacctgttccccggtcagatatt gctgagcctgaaagggaacaaaaacgtcgcaaaattgatactcacccttctccatcacat tcctcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacatt aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg gacaagtcgagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagag cggaaaagggatcactcaaacaatgaccgggaagtgccaccagacttaaccaagaggcgg aaagaggaaaatggaacaatggggatttcaaaacacaaaagtgaaagtccgtgtgagtct ccttatgcaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa ggcagcgactcatttaaatctgaaaaaatggataaaatctcttccggtggcaaaaaggag tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag gaagagaagaaacaatatccttttcatcttattgtttttaattag

DBGET integrated database retrieval system