Vicugna pacos (alpaca): 102539986
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Entry
102539986 CDS
T08098
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102539986 (CHD7)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102539986 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
102539986
NCBI-ProteinID:
XP_031548079
LinkDB
All DBs
Position
29
AA seq
2746 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFGSLQPSLHHPSPT
QSQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGLASPHSQYHTPPVPQVPHGGGGG
GQLGVYPGMQSERHGQSFVDSGSMWGPRAVQVPDQIRAPYQPAPSGPPAQGHPQHLQQMG
SYLARGDFSMQQHGQPQQRLGQFPQGQEGLSQGNPFIATSGPGHLSHVPPQSPGLAPSLR
HSVQQFHHHPPTALHGESVAHSPRFSPNPPPQGAVRPQTLNFSSRSQTVPSPTINNSGQY
SRYPYSNLNQGLVNNTGMNQNLGLTSNTPMNQSVPRYPSAVGFPSSSGQGLMHQQPIHPS
GSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIPMEVGSYPNM
PHPPPSHQPPGAMGMGQRNMGPRNMQQSRPFMSMSSAPRELAGHLRPNGCPGVGLADPQA
IQERLLPGQQHPGQQPSFQQLPACPPMQPHPGLHHQSSPPPPHHQPWAQLHPSPQNTPQK
VPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSIEQQPQQKKKKKKNNHIVAED
PSKSFGKDDFPGGVDSQELNRNSLDGSQEEKKKKKRPKAKKEPKEPKEPKEKKEPKEPKT
PKAPKIPKEPKEKKAKTATPKPKPSKKSSNKKPDSEASALKKKINKGKTEGSENSDLDKT
PPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADEADAAGRDSPSNTSQSE
QQESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKTFSYLHCQWASVEDLEKDK
RIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCS
LPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLRE
YQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPN
WEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTD
CPELRSIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHF
LEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVEL
TNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFK
ETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRR
YPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP
QNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPN
GVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFA
KASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKE
DELMEFSDLESDSEEKPCAKPRRPQDRSQGYARSECFRVEKNLLVYGWGRWTDILSHGRY
KRPLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVNHSGLSAPVP
RGRKGKKVRAQSTHPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQ
EVIGDQAEKILEGADSSEADVWIPEPFHAEVPADWWDKEADKSLLIGVFKHGYEKYNSMR
ADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRTPFKDEIDE
FANSPPEDKEEPLEVRAPGKHSDSGADLGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMR
QEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVIFDPVKQ
QFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPTKPDDEPPDLSSAIEPITEER
ASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVS
RTDYHILNDPELSFLDAHKNFAQNRGAEAERGEKDGRQDREAEAGSAKNEPKGVEVAADT
GPKSISEKGSEEDDEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETRDGF
YMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLIP
GYTPPAADSPLQKRSLAELSVVGQASISGSEDLTTSPQLSKDDALNLSVPRQRRRRRRKI
EIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLTSKFIL
PNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEGLDLLFM
SHKRTSLSAEETEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLVGEDAPK
NKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERV
PVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGP
VVRVSTVAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGAGEEKAPDKAEGAAFPEEE
NLEGSDAEESLDKTAESSVLEDEIAQGEELDSLDGGEDVENNEQDE
NT seq
8241 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatattttcagcgaaggc
ctggagggccttggagagtgtggttaccctgaaaacccggtgaatcccatgggtcagcag
atgccgatagaccaaggctttggctcgttgcagccatccctccaccatccctcccctacc
cagagtcaaaccaagctgacccacttcgatcactataatcagtacgagcagcagaagatg
cacctgatggatcagcccaacagaatgatgagtaacgcccctgggaacggactggcgtct
ccccactcgcagtatcacacccctcccgtcccccaggtcccccacgggggcggcggcggc
ggccagctgggcgtctaccctggcatgcagagcgagcggcacggacagtctttcgtggac
agcggctccatgtggggtccccgggccgtgcaggtgccggaccagatccgggccccctat
cagccggcgccatcggggcccccggcgcagggccacccccagcacctgcagcagatgggt
agctacctggcgcgcggggatttctccatgcagcagcacggccagccgcagcagaggctg
ggccagttcccccaaggccaggagggcctaagtcagggcaaccctttcatcgccacctca
ggacctggccacttgtcgcacgtgcccccgcagagccccggcctggcgccgtccctgcgc
cactccgtccagcagttccaccatcaccccccaactgctctccacggcgaatccgttgcc
cacagccccagattctcccctaatcctcctccacaaggcgctgtcaggccgcaaaccctt
aactttagttctcggagccagacagtcccctcacctactataaacaactcagggcagtat
tctcgatatccttacagtaacctaaatcagggattagttaacaatacagggatgaatcag
aatttaggccttacaagtaatactccaatgaaccagtccgtaccaaggtaccccagtgct
gtgggattcccatcgagcagtggtcaaggactaatgcaccagcagcccatccaccccagc
ggctcacttaaccaaatgaacacacaaactatgcatccttcacagcctcagggaacttat
gcctctccacctcccatgtcacccatgaaagcaatgagtaacccggcaggtactccgcct
ccgcaagtcaggcccggaagtgctgggatcccgatggaagtcggcagttatccaaatatg
ccccaccctccgccgtctcaccagccccctggtgccatgggaatgggacagaggaatatg
ggccccaggaacatgcagcagtctcgtccgtttatgagcatgtcctccgcaccgcgggag
ctggccgggcacctgagacccaacggctgtcccggcgttggccttgcagacccgcaggca
atccaggagcggctgctgcccggccagcagcatcctggccagcagccgtccttccagcag
ttgccagcctgccctccgatgcagccccaccccggcttgcaccaccagtcttcgcccccg
cccccgcaccaccagccttgggcacagctccacccatcgccccagaacaccccgcagaaa
gtgcctgtgcctcagcattctccatcggagccctttctagagaaaccagtgccggatatg
actcaggttagtggaccgaacgcccagctagtgaagagtgatgattacctgccgtcgata
gaacagcagccacagcaaaagaagaagaaaaagaaaaacaaccacattgttgcagaggat
cccagtaaaagttttggtaaagatgacttccctggtggggttgatagccaggaactaaat
aggaactcactagatgggtcccaagaagaaaaaaagaaaaagaaaaggccgaaggcaaaa
aaagagcccaaggaaccgaaagaacccaaggagaaaaaagagcccaaggaacccaagacc
ccgaaagcccctaagattcccaaagagccaaaggaaaagaaagcaaaaactgccacgcca
aaacccaaacccagcaagaagtcaagtaataagaaacccgattcagaagcgagtgctttg
aagaaaaagatcaacaagggaaaaacggaaggttctgaaaattcagacttagacaaaacg
cccccaccatctcctcctcctgaagaagacgaggacccaggtgttcagaagagacgttcc
agcaggcaggtgaagaggaagcggtacacagaggacctggagttcaagatctccgatgag
gaggcggacgaggccgacgctgctgggagggactccccctcaaacacctcgcagtcagag
cagcaggaatctgttgatgcggaaggtccagtggtagaaaaaattatgagtagtcgctca
gtaaaaaaacagaaggaatctggagaggaggtagaagttgaggagttctacgtgaaatac
aaaaccttctcgtatcttcattgtcagtgggcatctgtagaagatctggaaaaagataag
agaattcagcaaaagattaaacgatttaaggcaaagcagggccagaacaaattcctttca
gagattgaagatgagctttttaatccagattatgtggaggttgaccggataatggacttt
gcacgtagcacagatgaccggggagagcctgtgactcactatctggtgaagtggtgctcg
ctgccttacgaggacagcacgtgggagctgaggcaggacatagatcaagcgaagattgaa
gagtttgagaaactgatgtccagggagccggaaacagagcgtgtggagcgacctcctgct
gatgattggaagaaatcggagagttccagggagtataaaaacaataacaaactcagggaa
taccagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatt
ttagcagatgaaatgggtttgggaaaaactatccagtccattacatttctctatgagata
tatttgaaaggaatccatggcccttttttagtaattgccccattgtccacaatccccaac
tgggaaagggagttccggacctggacagagttgaacgtggttgtgtatcatgggagtcaa
gctagtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtg
ataaaggggtcctacaagttccatgccatcatcactacctttgagatgattctgactgac
tgtcctgagctgcggagtattccctggcgctgtgtggtcattgacgaagcccacaggctg
aagaacaggaactgcaagctgctggagggactcaagatgatggacctggaacacaaagtg
ctgctgacagggaccccgctccagaacacggtggaggagctgttcagcctgctccatttc
ctggaaccgagtcgcttcccttcggaaaccaccttcatgcaagaatttggtgacctgaag
acagaagagcaggtgcaaaaactccaggctattctaaagccaatgatgttgagacgtctc
aaggaagatgtggaaaagaacttggcccccaaggaagaaacgatcattgaagttgagcta
acaaacattcagaagaaatattaccgagccatccttgagaagaattttacgtttctttcc
aaaggtggtggtcaagctaatgtacctaaccttttaaacactatgatggaattacggaag
tgctgcaatcacccctaccttatcaacggtgctgaagagaaaattttggaagagtttaaa
gaaacacacaacgcggactctccagattttcagctccaggcgatgatccaggctgctggc
aagctcgtgctgattgacaagctgctgccgaagctgaaggctggtggccacagggtgctc
atcttctcccagatggtgcgctgcctggacatcctggaagactacctcattcagagacgg
tacccgtacgaaaggattgacggccgggtcagaggcaacctccgccaggcagctatcgac
cgattctccaagcctgactccgataggttcgtcttcctcctgtgcacgcgggcaggaggc
ttaggcattaatctcactgctgctgatacctgcatcatctttgattctgactggaatccc
caaaatgatctccaggctcaggctagatgtcacaggataggacagagcaagtctgtgaaa
atctacaggctgatcacaagaaattcttacgaaagggaaatgttcgacaaggctagcttg
aagctcggtctggataaagccgtcctgcagtccatgagcggaagagaaaacgctcccaat
ggggtacagcagctttccaagaaagaaatagaggatttgctccggaaaggggcctacggt
gcactcatggacgaggaggacgaggggtctaagttctgcgaggaggacatcgaccagatc
ctcctccggcgaacccacaccatcaccatcgagtctgagggcaaggggtccacatttgct
aaggccagttttgttgcctctggaaacaggacagatatttccttggacgacccgaatttc
tggcagaagtgggccaagaaggccgagttggatatcgatgccttaaatgggcggaacaac
ctggttattgacactccgagagtgaggaagcagaccaggctgtacagtgcagtgaaggag
gacgagctgatggagttttcggacctggagagcgattccgaagagaagccgtgcgcgaag
ccgcggcggccccaggacaggtcccagggctacgccaggagcgagtgcttccgagtcgag
aagaacctgcttgtctacggctggggacggtggacggacatcctttcccacgggcgctac
aaacgtccgctcactgagcaagacgtggaaaccatctgcagaaccatccttgtgtactgc
ctcaaccactacaagggcgacgagaacatcaaaagcttcatctgggatctgatcacgccc
acagctgacggccagacgcgggccttggtcaaccattccggtttgtcagccccggtgccc
agggggcggaagggtaagaaggtgagagcccagagcacgcatcccgtggtgcaggacgca
gactggctggctggctgcaaccccgacgccctgttccaggaggacagctacaagaagcac
ctgaaacaccactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctaagacaa
gaagtgatcggagaccaggccgagaagatcctggagggtgccgactcaagcgaagctgat
gtgtggatcccggagcctttccacgcggaggtgcccgcagattggtgggataaggaagca
gataagtccctcctgattggagtgttcaaacacgggtatgagaagtacaattccatgcga
gctgaccccgcgctgtgcttcctggaacgagttgggatgcctgatgccaaggccatcgct
gccgagcagaggggaacagacatgctagcagatggcggtgacgggggagaatttgataga
gaagatgaagacccagaatataaaccaaccagaacgccattcaaggatgaaatagatgaa
tttgcaaattctcctccagaagataaggaagaacccctggaagtacgtgccccaggcaag
cacagcgacagcggtgctgatttaggccagctgtactggcccaacacctcaacgctgacc
acccgtctgcgcaggctcataactgcctatcagcgcagctataaaaggcagcagatgagg
caggaggccttgatgaagactgaccggcggaggcggcggcctcgggaggaagtgcgggcc
ctggaagccgagagggaagctatcatatccgagaaacggcagaagtggaccagaagggaa
gaggcggacttctaccgcgtggtgtccacttttggggtcatttttgaccccgtgaaacag
cagttcgactggaaccagtttcgagccttcgccagactggacaaaaagtccgacgagagt
ttggagaaatacttcagctgcttcgtagccatgtgtcggcgggtgtgtcggatgcccacg
aagccggatgacgagccgcccgacctctcctcggcgatcgagcccatcaccgaggagcgc
gcctccaggaccctgtaccgcatcgagctgctgcggaagatccgcgagcaggtcctgcac
cacccgcagctgggcgagcggctgaagctctgccagcccagcctggacttgcccgagtgg
tgggagtgcgggcggcacgaccgggacctgctggtcggagctgccaagcacggcgtcagc
cggacggactaccacatcctcaacgacccggagctgtccttcctggacgcgcacaagaac
ttcgcccagaaccgaggggcggaggccgagcgcggcgagaaggacgggaggcaggaccgc
gaggccgaggccggctcggcgaaaaacgagcccaaaggggtggaggtcgccgcggacacg
gggcccaagtctatttcagagaaaggttctgaagaggacgacgaggaaaagctggaggat
gacgacaagtcggaggaatcctcccagcctgaagcaggagctgtctcgagggggaagaat
tttgatgaagaaagcaatgcttccatgagcactgccagggacgaaacccgagatggcttc
tacatggaggacggggacccgtcggtcgctcagctcctgcacgaaagaacgtttgccttc
tcattttggccgaaggaccgagtaatgataaaccgattagacaacatctgtgaagcagtg
ttgaaaggcaaatggccggtaaataggcgccagatgtttgatttccagggcctcatccct
ggttacacgccccccgccgccgacagtcccctacagaagcggagcctggcagagctctct
gtggtcggccaggccagcatcagcggcagtgaggacctcaccacttcccctcagttgtcc
aaggatgatgccctcaacctctccgtccctcgccagcggaggaggaggaggagaaaaatc
gaaatcgaggccgaaagagctgccaagcggcgaaacctcatggagatggttgcccagctg
cgcgagtctcaggtggtctcggagaacggacaagagaaagtcgtggatttatcaaaggcc
tcgagagaggcgacaagctctacctcaaatttttcatctcttacttcaaagtttatcttg
cctaacgtctcgacaccggtgtctgatgcctttaagactcaaatggagctgctccaggca
ggtctgtcccgcacacccacgaggcatctgctcaacggctccctcgtggacggagagcct
cccatgaagaggaggcggggacggaggaaaaacgtggagggcctcgatctgctgttcatg
agccacaaacggacgtcattgagtgcagaggagactgaggtgaccaaagcttttgaagaa
gatatagagaccccacctacaagaaacattccttctcctggacagctggacccagacacg
cggatccctgttataaatctcgaagatgggactaggctggtgggggaggatgctccgaaa
aacaaggatttagttgaatggctgaagctgcatcccacttacactgttgatatgccaagt
tatgtaccaaagaacgcggacgtgctgttttcctcatttcagaaaccgaaacagaaacgg
catagatgtcgaaaccctaataaattggatataaacactttgacaggagaagaaagggtg
cctgttgtcaataaacgaaatgggaagaagatgggtggagctatggcacctccgatgaag
gatctaccccggtggctggaggaaaaccccgagtttgcagttgccccggactggacggat
atagtcaagcagtctggattcgttccggagtccatgttcgaccggctgctcaccgggccg
gtggtgcgggtgtcgaccgtggccccgggcctcttctacccgtccatgtttctacctccg
ggcctgggagggttgacgctgcccggcttccccgcgctggcggggctgcagaacgccgtg
ggcgccggcgaggagaaggctcccgacaaggccgagggcgccgccttcccggaggaggag
aacctggaaggcagcgacgcggaggagagcctggacaagacggccgagtcctccgtcttg
gaagacgaaatagcacagggtgaagagctcgactcgctcgacgggggagaagacgtagaa
aacaatgaacaggacgagtaa
DBGET
integrated database retrieval system
