Vicugna pacos (alpaca): 102539990
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Entry
102539990 CDS
T08098
Symbol
PATJ
Name
(RefSeq) LOW QUALITY PROTEIN: inaD-like protein
KO
K06092
InaD-like protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04390
Hippo signaling pathway
vpc04530
Tight junction
vpc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
102539990 (PATJ)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102539990 (PATJ)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102539990 (PATJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
102539990
NCBI-ProteinID:
XP_031540209
UniProt:
A0A6J3B259
LinkDB
All DBs
Position
13
AA seq
1906 aa
AA seq
DB search
MPENPATDKLQVLQVLDRLKMKLQEKGDTSQNEKLSMFYETLKSPLFNQILTLQQSIKQL
KGQLSHLPSDCSANFDFSRKGLLVFTDGAITNGNAHRSSNNLTVSGLFPWTPNSGNEDFN
SIMQQMAQGRQIEYIDIERPSTGGLGFSVVALRGQNLGEVDIFVKEVQPGSIAGRDQKLK
ENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLVVAREPVHTKSSTPAGLTDAILPET
VRWGHIEDVELINDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTN
VQGMTSEQVAQVLRNCGNSVRMLVARDPIGEISVTPPAPAALPVALPAVDNRSPGFDNST
HFETYDVELIKKDGQSLGIRIVGYVGNSHTGEASGIYVKSVIPGSAAYHNGQIQVNDQIV
AVDGVNIQGFVNQDVVEVLRNAGQVVHLTLVRRKASSSASPLERPSDGGTVVETPKTALF
LTGAVETETNLDEVEETEERMDNLKNNDIQALEKLERVPDSSENELKSRWENLLGPDYEV
MVATLDTQIADDAELQKYSKLLPIHTLRLGMELDSFDGHHYVSSIAPGGPVDTLNLLQPE
DELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDEASVDEPRTTEAPLPAMEA
DHNIDVNTEEDDDGELALWSPEVKTVELVKDHKGLGFSILDYQDPIDSTRSVIVIRSLVA
DGVAERSGKLLPGDRLVSVNEYSLDNTTLAEAVEVLKAVPPGIVRLGICKPLVEDDKEEE
GHILHSNNEDRTGISGTIHDKNSSLILEAPKGFRDEPYFKEELVDESFLDLGKVFQSQQK
DIDNSREAWEMHEFTAPRLQEMGEEREMLVDEEYELYQGCFQAMESYPSSHIQEAAPVLP
MKEFHFGAQWFHDPQLPESQEARSMMSLYSPEMQQCGCSTENMMEENFGIDSLPSIPCTE
ANSQPGRFDDLEDLNSLTKSSLDLGMMIPNDVHGPGLLVELPAVVQRREQEDLPLYQLPR
TQAVSKASAYTGMLSSRYATDACELPEREEGEGEETPNFSHWGPPRIVEIFREPDVSLGI
SIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHREA
VEAIKNAGNPVVFVVQSLSSTPRVIPSAHNKANKIAHNQDQDTQGKKEKRRGTAPPPMRL
PPPYKAPSDDSDDTEEEHAFTNEKIKQRYADLSGELHIIELEKDKNGLGLSLAGNKDRSR
MSIFVVGINPEGPAATDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRN
EDAVXQMAVTPFPLPSSSPSSIEDQSGTELVSSEEDGSLEVGIKQLPERESSKLEDISQV
IGQGVVAGQQKALECPTDNVGSQMKQQKYSTKVSFGSQEIPLAPNPSYHSTDADFTGYGG
FQAPLSVDPATCPIVPGQEMIIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARD
GRLWAGDQILEVNGIDLRSASHEEAITALRQTPQKVRLVVYRDEAHYRDEENLEIFPVDL
QKKAGRGLGLSIVGKRTGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETV
ATVLKCAQGLVQLEVGRLRAGSWTSSRKTSQNSQGSQQSTHSSFPPSLGPVITSLQNLVG
TKRASDPSQKNSGTDVGPRTVEIVRELSDALGISIAGGKGSPLGDIPIFIAMIQASGVAA
RTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVADTNISAIATQLENMST
GYHLGSPTAEHHSEDTETPPPKIITLEKGSEGLGFSIVGGYGSPHGDLPIYVKTIFAKGA
AADDGQLKRGDQILAVNGETLEGVTHEQAVAILKRQRGTVVLTVLS
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatcctgctacagataaactgcaggtcctgcaagttctcgatcgcttgaaa
atgaaattgcaggagaagggtgacacttcacagaatgagaagctgtctatgttttatgag
acactaaagagccctctcttcaaccaaatacttacacttcagcagtccatcaagcagctg
aaggggcaactcagccacctaccctcagattgttcagccaacttcgacttttctaggaaa
ggtttattggtattcacggatggtgccattactaatgggaatgcccaccggtcctctaat
aacttaactgtatctgggctgtttccttggactccaaattcaggaaatgaagattttaac
tcaatcatgcaacagatggcccagggccggcaaattgaatatatagacatagaacggccc
tcaactggaggccttggattcagcgtggtggcccttagaggtcaaaatctgggagaagtc
gatatcttcgtgaaggaagtgcagccagggagtattgctggcagggatcaaaagttaaag
gaaaatgaccaaatattggctattaatcacacgcctctggatcagaacatttcccatcag
caagctattgcattattacaacaaaccactggatctttgcgtctggttgtggccagggag
ccagtccacacaaagagcagtactcctgccggcctaactgatgcaattctgcctgaaaca
gttcgttggggccatattgaagatgttgagctcattaatgatggctctggattaggtttt
ggaatagttggaggaaaatcaagtggtgtagttgtgaggactatagttcctggaggatta
gcagatcgagatggaagactccagacaggagaccacatcttgaagattggtggcacaaat
gtgcaaggaatgaccagtgagcaagttgcacaagtgctaagaaactgtgggaattctgtc
aggatgcttgttgcaagagacccgattggtgaaatttctgtaaccccccctgctcctgca
gccttacctgttgccctgcctgctgtagacaacaggagccctggttttgacaattctact
cattttgaaacttatgatgttgaactcattaagaaagatggacagagtcttgggattaga
attgttggctatgttggaaactctcatacaggggaagcttcagggatttatgtgaaaagt
gtaataccgggcagtgctgcataccacaacggccagattcaagtgaatgaccaaatagtt
gctgttgatggggtgaatattcagggttttgtcaaccaggatgttgttgaagtgttacga
aatgcagggcaagtggtacacctgaccctagttcgaaggaaggcatcttcatctgcttct
ccactggaacggccctcagacggaggaactgtggtagaaacaccgaaaacagctctcttt
ctgactggagcagtggaaacagagactaatttggatgaagttgaggaaactgaagaaaga
atggataatctaaaaaataatgacatacaagccttagaaaaactggaaagagtcccagac
tcttcagaaaatgagctgaaatccagatgggaaaacctgttgggccctgattatgaagta
atggttgctactttggacacgcagattgcagatgatgctgaattacagaagtattcaaag
ctgctgcccattcacactctgaggcttggcatggagctagattcctttgatgggcaccat
tatgtctcttcgattgctccaggtggtcctgttgatacactgaacctcctacagccagag
gatgagcttcttgaggtcaatggcgtgcagctctatgggaagtctcgccgagaagcagtc
tcctttctcaaagaagtgccgcccccctttaccttggtgtgctgtcgacggttgtttgat
gacgaagcctctgtggatgaaccaaggaccactgaggcccctctccctgcaatggaggcc
gaccacaatatagatgtcaatactgaagaagatgatgatggggaattagcactgtggtct
cctgaagtcaagactgttgaactagtgaaagatcataaaggcttggggttcagcattttg
gattaccaggaccccatagattccacaagatcagtgattgtgattcgctccctggtggca
gatggggtggcagaaagaagtggaaaactgttacctggagaccgcctggtctctgtcaat
gaatacagtctggacaacaccacacttgctgaagctgtggaagtgttgaaagctgtgcca
ccaggcattgtacgccttggcatctgtaagcctttggtggaagatgataaagaggaagaa
gggcatattttacattcaaacaacgaagacagaactggaatttcaggaacaattcatgac
aaaaattcatctttaatacttgaagcacccaagggatttagagatgaaccctattttaaa
gaagagcttgtggacgagtcatttctagatttgggaaaggtcttccagtcccagcagaaa
gacatagacaacagcagagaggcctgggaaatgcatgaatttacagcccctagactgcag
gaaatgggtgaagagagagaaatgcttgttgatgaagaatatgaactgtatcaaggctgc
tttcaggccatggagtcgtatccctcatcgcacattcaagaggctgctcctgttctgccc
atgaaggaatttcactttggtgcacagtggttccatgatccgcagctacctgagtctcag
gaagcaagatccatgatgagtctgtattcgccggagatgcagcagtgtggctgtagcact
gaaaacatgatggaagaaaattttggcatcgattccctgccctccataccctgcactgaa
gcaaacagccaaccaggcagatttgacgatctggaagatcttaattcattaaccaaaagc
agtctggatttaggcatgatgattccaaatgatgtccatggtcctggcttgcttgttgaa
cttcctgctgtggttcagaggagggagcaagaagatttgcctctataccaactccccagg
actcaagcggtttctaaggcctcggcatatacaggaatgttgtcttctagatatgccact
gatgcatgtgaattacccgagagagaagaaggtgaaggagaagaaactccaaacttcagc
cactggggaccaccaagaattgttgagatttttagagaacccgacgtatctcttggtatt
agtattgttggtggacaaactgttatcaaacgcctgaagaatggagaggagcttaaaggc
atatttatcaaacaagttttggaagacagtccagcaggaaaaacaaatgctcttaaaact
ggagataaaatacttgaggtgtctggagtagacttgcagaatgcctcgcacagagaagca
gttgaggccattaagaatgcaggaaaccctgtagtgttcgttgttcagagtctgtcatcc
actccaagagtcattcctagtgcgcataacaaggccaacaaaatcgctcataaccaggac
caagacacgcaaggaaagaaagaaaagaggcgaggaactgctccacctccaatgagactg
ccacctccctataaagctccgtctgatgacagtgatgacactgaagaagaacatgcattt
actaacgaaaaaatcaagcaaagatatgcagacctgtctggagaactgcacattattgaa
cttgaaaaggataagaatggacttggactcagccttgccggtaataaggacaggtcacgc
atgagcatatttgtggtgggaattaacccagaaggacctgctgccacagatggacgaatg
cgtattggagatgaactgttggagataaacaatcagatcctctacggacgaagtcaccaa
aatgcatctgccattattaagactgccccgtcaaaggtcaagctggttttcatcagaaat
gaagatgccgtcnatcagatggctgttactccctttccgttaccatcaagttccccatct
tctattgaggatcagagtggcactgagctggttagtagtgaggaggacggcagtctcgaa
gttggtattaaacaattgcctgagcgtgaaagctccaaactggaagacatctcccaggtg
attggtcaaggtgtggtggcaggtcaacagaaggcactggaatgtccaactgacaacgtt
ggcagccaaatgaaacagcaaaaatattcgacaaaagtctcctttggttcacaagagata
cctttagcaccaaatccatcatatcattcaacagatgcagacttcacaggctatggtggc
ttccaggctcctctgtcagtggatcctgccacgtgtcccattgttcccggccaggagatg
attatagagatatccaagggccgttcagggcttggtctcagcattgtgggaggaaaagac
acacccttggacgctatagttatacatgaagtctatgaagaaggggcagcagccagagat
ggaagactttgggctggtgaccagatattagaggttaatgggattgacctgaggagcgcc
agccacgaagaagccatcacagccctgaggcagaccccccagaaggtgcgactggtggtg
tacagagatgaggcgcactacagggacgaggagaacttagagattttccctgtggatctg
cagaagaaggccggccgaggactgggcctgagcatcgttgggaaacgaactggaagtgga
gtgtttatttctgacatcgtgaaaggtggagctgcagaccttgatgggagattgattcag
ggagatcagatcttgtctgtgaacggggaggacatgagaaatgcctcccaggagacagtg
gccactgtcctcaagtgtgcacaggggcttgtgcagctagaggttggaagactccgagct
ggttcctggacctcctcgaggaagacatcacagaatagtcaggggagtcagcagagcaca
cacagcagctttcctccttcccttggtcctgtcatcaccagcctgcagaacctggtcggc
accaaaagagcttcggatccttcacaaaaaaactcaggcacagatgtgggaccaaggact
gttgagatagtcagggagctcagtgatgcccttggaatcagtattgctggaggaaaaggg
agtcccttaggagatatcccaatatttattgccatgattcaggccagcggtgtggctgca
cgtacacagaagcttaaagttggagatcggattgtcagcattaatgggcaacctttggat
gggctgtctcacgcggacgtggttaatctgctgaagaacgcctacgggcgcattatcctg
caggttgtagcagacaccaacataagcgccatagccactcagcttgagaacatgtccacg
ggctaccaccttggttcgcccactgctgagcaccattcagaagacacggaaacacctcca
cctaagattattactttggagaaaggctctgaaggattggggtttagtattgtagggggt
tatggaagtccccatggagacctgccaatttatgtcaagactatatttgcaaagggagca
gctgcagatgacggccaattgaagcgaggcgatcagattttagctgttaatggcgaaact
ctggaaggtgttactcatgagcaagctgtggccattctaaaacgccagagagggactgta
gtcttaactgtgctgtcatga
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