Vicugna pacos (alpaca): 102540004
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Entry
102540004 CDS
T08098
Symbol
RBM12B
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 12B
KO
K24526
RNA-binding protein 12
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102540004 (RBM12B)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102540004 (RBM12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
102540004
NCBI-ProteinID:
XP_006220335
UniProt:
A0A6I9IVD2
LinkDB
All DBs
Position
25
AA seq
995 aa
AA seq
DB search
MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRS
GGLIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGASGVGSLSNFVEAVKEEASNS
GYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV
DGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNA
IKEGDIPMRTEEHSPPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDL
RNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHVDPVSR
KQMLKFIECYEKKRPASAEKERLGHVSQKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFF
ADFNLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEVQM
QEFGVNFSSVSSERMHDHTQSCDRDDYPHLFDTDDLPVYSAGPSENFRHQQEDLRQLDNF
KHPQGDFRPPDRRPPEDFRHSPEDFRRSPEDFRRLREEHFRGPPEEDLRCPWEEEDFRYP
REEDWRRPPEDDFRRPPKEDFRRPPEEDWRRPPEGDFRRPPEEDWRRLPEEDFRRLPPGE
WRRPPEGGFRRPHEEDFRRLPEEDFQRPPEEDFRRPHEEDFRHSPEEDFRRSPEEDFRRP
PPEHFRRPPPEHFRRPPPEHFRRPPSEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEH
FRRPPQEHFRRPREEDFRHSLDEDFRGPPDEDFRHPPDEDFRSPQEDDFRCPSDEDFRRL
PEEDLREAPEEDPRLPDNFRLPGEEFRSPPDXFRGHRPFVNFGRPEGGKFDFGKRNMGSF
PEGRFMPDPKLNCNSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYNEQGLPT
GEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagtcatccgtttactggggcttccttttattgcggggcctgtggatattcgt
cacttcttcacgggattgactattcctgatggaggagtgcatataattggaggggaagtt
ggggaggcttttattatttttgcaacagatgaagatgcaagacgtgccataagtcgttca
ggagggcttatcaaggattcatctgtagagctgtttcttagtagtaaggcagaaatgcag
aagactatagaaatgaaaagaaccgatcgcatgggaagagagcgaccaggatctggggca
tcaggggttggcagcttatctaattttgttgaggctgttaaagaagaagcaagtaattct
ggatatggctctccgattaatcaagacgctgggtttcatactaatggtacaggacatggt
gacttaaggccaagaaagacacggccattgaaggctgagaatccttacttgtttctgcga
ggtttgccttatttagtaaacgaagatgatgtacgtgtttttttctctggtttgtgtgtg
gatggagtaattttcttaaagcatcatgatggccgaaataatggtgatgccatagtaaaa
tttgcttcatgtattgatgcttcaggaggtcttaaatgtcatagaagttttatgggctca
agatttatagaagtaatgcaaggctcagaacaacagtggattgagtttggaggtaatgca
attaaggagggtgacattcctatgaggactgaagaacattcgccaccaaggggaattaat
gatagacattttcggaaacgatcgcattcaaaatctcccagaagaacacgctctcgttct
cctcttggattttatgttcacttaaaaaatctgtccctaagtattaacaaaagagattta
aggaatttctttagagatactgatctgactaatgaacagattaggtttttatataaagat
gaaagaagaacaagatacgcctttgtgatgttcaagactctgaaagactataacactgct
ctgggtttgcataagactgttttacagtaccgtccagttcatgttgatccagtttctaga
aaacaaatgctgaagttcattgaatgttacgaaaagaaaagaccagcatcagcagagaaa
gaaaggcttggacacgtttcacaaaaacactctcaagaaggctactctggccagaaactg
tgcatatatataagaaattttccatttgatgttacgaaagttgaagtgcagaagttcttt
gcagactttaatcttgctgaggatgacatttacttgctttatgatgacaaaggagttggt
ctgggagaagcattggtgaaattcaaatcagaagaacaggccatgaaagctgaacgttta
aaccggcgaagattcttggggacagaggtattgttgaggctcatatccgaggtacaaatg
caggagtttggtgtaaatttttcttcagtgtccagtgagagaatgcatgaccatacacag
tcatgtgatagagatgattatcctcatttatttgacacagatgatctaccagtatactca
gctggcccttctgaaaactttaggcatcagcaagaggacttgcggcaactggacaatttt
aagcatccccaaggagatttccgaccgcctgataggcggcctcctgaagattttaggcat
tccccggaggacttcaggcgctccccggaagacttcaggcgtcttcgggaggaacacttc
agggggcctcctgaggaggacttaaggtgcccttgggaagaggaggatttcaggtacccc
cgggaggaggactggaggcggccacctgaagatgatttcaggcggcctcccaaggaagac
ttcaggagaccccccgaggaggactggcgaaggccccctgagggagacttccggcggcca
ccagaggaggattggaggcggcttcctgaggaggacttcagacggcttccccctggggaa
tggaggcgaccacctgagggaggcttcaggcggccccatgaggaggacttcaggcgactt
ccagaggaagacttccagcgacctcctgaagaggacttcaggcggccccacgaggaggac
ttcaggcattctcctgaggaggatttcaggcgttctcctgaggaggattttcggcggcca
cccccggagcactttcggcggccgcccccggagcacttccggcggccacccccggagcat
ttccggcggcctccctcggagcacttccggcggccgcccccggagcatttccgtcggcct
ccccaggaacatttccgtcggccgccccaggaacacttccggcggccgcctcaggagcat
ttcaggcggcctccccaggagcatttcaggcgcccacgagaggaagattttaggcattcg
ctggatgaagatttcaggggccctccagatgaagactttaggcaccctcctgatgaggac
ttcaggagtcctcaggaggatgatttccgatgcccttctgatgaggacttcaggcggctc
ccagaggaagacctcagggaagctccggaggaggaccctagacttcctgacaattttaga
cttcctggtgaggagtttaggagcccccctgatngatttagaggtcatcgcccttttgtg
aattttggtcgcccagaaggaggcaagtttgattttggaaagcgtaatatgggaagtttt
cctgaggggagatttatgcctgatccaaaattaaattgtaattcaggtagagtaacacct
attaaaataatgaatcttccatttaaggctaatgttaatgaaattctagactttttccat
ggttatagaatcatacctgattccgtttcaatacagtataatgagcaaggattacctaca
ggggaagccattgttgccatgataaactacaacgaagctatggctgctatcaaagatctg
aacgatagaccagttggcccccgcaaagttaagttaattttgctctag
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