Vicugna pacos (alpaca): 102540020
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Entry
102540020 CDS
T08098
Symbol
BHLHE40
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102540020 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102540020 (BHLHE40)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
102540020 (BHLHE40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
102540020
NCBI-ProteinID:
XP_006196574
UniProt:
A0A6I9HWZ9
LinkDB
All DBs
Position
17
AA seq
411 aa
AA seq
DB search
MERIPSAQPXPACLPKAPGLEPGDLPGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRSVEAGQEMFCSGFETCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGASRKPSDPAPKVMDFKENPGSLAKGSEGPGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGESEKSELRVEQPYFKSDHGRRFMGDRIGAIKQESEEPPTKKSRMQLSDDEGHF
PSSDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAAA
LTSFMNPDKISAPLLMPQRLPSPLPPHPAIDSSALLQALKQIPPLNLETKD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatccccagcgcgcaaccgncccctgcttgcctccccaaagcgccaggactg
gagcccggagacctaccagggatggattttgcccacatgtaccaagtgtacaagtcgagg
cggggaataaagcggagcgaagacagcaaggagacctacaaactgccgcaccggctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctcccc
gaacatctcaaacttacaactctgggtcacttggaaaaagcagtggttcttgaacttacc
ttgaagcatgtgaaagcgctaacaaacctaattgatcaacagcagcagaaaatcattgct
ctgcagagcggtctgcaagctggtgatctgtcggggagaagtgtcgaagccggtcaagag
atgttctgctcaggcttcgagacgtgtgcccgggaggtgcttcagtacctggccaagcac
gagaacacccgggacctaaagtcttcgcagctggtcacccacctccaccgtgtggtctcc
gagctcctgcagggcggtgcctccaggaagccgtcagacccagctcccaaagtgatggac
ttcaaggagaatcccggctccctggccaaaggctctgaaggcccaggcaaaaactgtgtg
cccgtcatccagcggactttcgctcactcgagcggggagcagagtggcagcgacacggac
acagacagcggctacggaggagaatccgagaagagtgagctgcgcgtcgagcagccgtac
ttcaaaagcgatcatggacgcaggttcatgggagacaggatcggtgctattaagcaagaa
tcagaagaaccccccaccaagaagagcaggatgcagctctcagatgatgaaggccatttc
ccgagcagtgacctgatcagctccccgttcctgggcccacaccctcaccagcctcccttc
tgcctgcccttctatctgatcccgccctcggccaccgcctacttgcccatgctggagaag
tgctggtaccccacctccgtgcccgtgctgtacccgggcctcaacgcttccgctgcagcc
ctcaccagcttcatgaaccccgacaagatctcagcccccttgctcatgccgcagagactc
ccttcacccttgccaccccatccggccatcgactcttccgccctgctccaagctctgaag
cagattccccctttaaacttagaaaccaaagactaa
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